Gene
| Gene Model ID | pfu_aug1.0_372.1_15046 |
|---|---|
| Locus | scaffold372.1 : 38406 ... 47119 : + |
| To GenomeBrowser | scaffold372.1:38406..47119 |
| Genes list of scaffold | scaffold372.1 |
| Synonym | pfu_aug2.0_856.1_21214 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_372.1_15046.t1 | 1 | 1 | Peptidase_M54 | 28 | 159 | 1.5e-11 | 44.4 | 1.4e-14 | 2.6e-11 | 43.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_372.1_15046.t1 | gi|291223859|ref|XP_002731926.1| | PREDICTED: archaemetzincin-1-like [Saccoglossus kowalevskii] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_372.1_15046.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_372.1_15046.t1 atgaatgttaagtggttagaccctgtatacataacacaaacaaaatggaaaattaggaaaagaagtcacaagaaaacgag caaagagcagtaccttgtgagtgaattttaccgtcctctacagaagatgatgccaaaggatggctattgcattatgggat tgtcttggacagatttatatcctaaagaagagctgaactttgtacttggtgaggctaattacatgacatcatcgggtgta atgagctttggtcgctttgaacccaagacctttgatgctgataatgtgaaagacatatcttctattgacgcagatttgat gtggaaattgttaaaggtctcgagtcacgagctaggacatttgtttggactggagcactgtgagttttttcactgtctga tgaatggtagcagctcaatacaggaggcattgagccagcctagcttcctctgtccagtatgtctgcgtaaaatccagcat gtctgtaaatttgacatcacacaacgatatgaaaccttacttagcttctttgaggatctgaatgaagaaatgcccagtga aaagtggaccagtaatgtgacttggcttaagaagtgcttacactttttaaaatcaactgatactagctacatgtag |
|
Protein
| Protein ID | pfu_aug1.0_372.1_15046.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_372.1_15046.t1 MNVKWLDPVYITQTKWKIRKRSHKKTSKEQYLVSEFYRPLQKMMPKDGYCIMGLSWTDLYPKEELNFVLGEANYMTSSGV MSFGRFEPKTFDADNVKDISSIDADLMWKLLKVSSHELGHLFGLEHCEFFHCLMNGSSSIQEALSQPSFLCPVCLRKIQH VCKFDITQRYETLLSFFEDLNEEMPSEKWTSNVTWLKKCLHFLKSTDTSYM |
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