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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3727.1_08706
Locus scaffold3727.1 : 6586 ... 12851 : +
To GenomeBrowser scaffold3727.1:6586..12851
Genes list of scaffold scaffold3727.1
Synonym pfu_aug2.0_538.1_27519

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3727.1_08706.t1 1 1 TIMP 26 142 9.6e-07 28.5 7.9e-11 1.2e-06 28.2

Transcript
Transcript IDpfu_aug1.0_3727.1_08706.t1
Definition-
>pfu_aug1.0_3727.1_08706.t1
atgtctgaatttgtacgcagcagaatatacggactagaacttcttgatgtctaccgaaatgagactggagaagacctgag
agaaggggatgaaatagaagttagaaccgcgggaagtggagcgacctgtggaatcacactaacggaaggagaagagtact
atctatcagcttacagatggaaaaataccttctatgttggactttgtggaatgcacactactagtcttacacaactggaa
atggacggtatagtcaacgggaggttcgattgtaactgtaagataaacaatggatggcctagaatccctagaggtgagga
gaacctgacttgtgccctggcaatgctccgaggagggtatgattaccgatgtcttatgaactacgctgtctgtagattca
acgagcagagtaagagatgcagttgggaagctgatgaaagtcaagaggcttgtcagcgtttcagtttgccacctcgccca
taa

Protein
Protein IDpfu_aug1.0_3727.1_08706.t1
Definition-
>pfu_aug1.0_3727.1_08706.t1
MSEFVRSRIYGLELLDVYRNETGEDLREGDEIEVRTAGSGATCGITLTEGEEYYLSAYRWKNTFYVGLCGMHTTSLTQLE
MDGIVNGRFDCNCKINNGWPRIPRGEENLTCALAMLRGGYDYRCLMNYAVCRFNEQSKRCSWEADESQEACQRFSLPPRP

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