Gene
| Gene Model ID | pfu_aug1.0_373.1_00273 |
|---|---|
| Locus | scaffold373.1 : 1 ... 4405 : - |
| To GenomeBrowser | scaffold373.1:1..4405 |
| Genes list of scaffold | scaffold373.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_373.1_00273.t1 | 1 | 1 | CENP-B_N | 4 | 55 | 1.1e-08 | 34.2 | 2.2e-11 | 3.0e-08 | 32.9 |
| pfu_aug1.0_373.1_00273.t1 | 2 | 1 | DDE_1 | 29 | 57 | 6.5e-20 | 71.1 | 0.24 | 330.0 | 0.2 |
| pfu_aug1.0_373.1_00273.t1 | 1 | 1 | HTH_Tnp_Tc5 | 74 | 133 | 1.8e-15 | 56.4 | 2.8e-18 | 3.7e-15 | 55.4 |
| pfu_aug1.0_373.1_00273.t1 | 2 | 2 | DDE_1 | 162 | 247 | 6.5e-20 | 71.1 | 3.4e-22 | 4.5e-19 | 68.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_373.1_00273.t1 | gi|291240399|ref|XP_002740108.1| | PREDICTED: tigger transposable element-derived protein 6-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_373.1_00273.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_373.1_00273.t1 atggcgctgaaaagaaaaagaacagacctatccctggctgataaatatgaagcagtgatgctcctggaacagaagacccc ccagacagcgatagccaagaagtttggctgttcccaggctcaagtctccaacatctccaagaacagggatgccatccgcg aagaataccaatccaattccaatccagacaagaagagacaccgatctgggaaggcagtcgacgtggagggagccctgacc caatggtttacggaggcccggtccagagacatccccctatccggacctatcctggcagagaaggccgctgacctagccaa gcacctgaataagcctgacttctccgctaccaatggctggctagagagatggaagtccaggaacaacatcggattcaaga gaatgcacggtgagaagaaggacgccgatgagggagcagccactcaatggaaggagagcaccttgccaacgttcctccgt tcctaccatccagacgacatatataatgcggacgagacaggcatctactttagagcactaccggacgggaccctgacctt caaaacagacaacagtggcggatccaagaagtccaaggagagggtgactgtactcgtttgcaccaacatgaccgggaccg acaaacgaaaactgctggtgatcggcaagagcaaggatccccgctgctttcgaggagtaaagagcctacccgtgacgtac accaatagcggtaacgcgtggat |
|
Protein
| Protein ID | pfu_aug1.0_373.1_00273.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_373.1_00273.t1 MALKRKRTDLSLADKYEAVMLLEQKTPQTAIAKKFGCSQAQVSNISKNRDAIREEYQSNSNPDKKRHRSGKAVDVEGALT QWFTEARSRDIPLSGPILAEKAADLAKHLNKPDFSATNGWLERWKSRNNIGFKRMHGEKKDADEGAATQWKESTLPTFLR SYHPDDIYNADETGIYFRALPDGTLTFKTDNSGGSKKSKERVTVLVCTNMTGTDKRKLLVIGKSKDPRCFRGVKSLPVTY TNSGNAW |
|