Gene
| Gene Model ID | pfu_aug1.0_373.1_00276 |
|---|---|
| Locus | scaffold373.1 : 49543 ... 57465 : - |
| To GenomeBrowser | scaffold373.1:49543..57465 |
| Genes list of scaffold | scaffold373.1 |
| Synonym | pfu_aug2.0_44.1_13460 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_373.1_00276.t1 | 1 | 1 | DUF4559 | 55 | 218 | 4.4e-06 | 26.0 | 1.4e-09 | 1.1e-05 | 24.8 |
| pfu_aug1.0_373.1_00276.t1 | 1 | 1 | NACHT | 376 | 544 | 1.1e-07 | 31.6 | 7.1e-11 | 5.2e-07 | 29.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_373.1_00276.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_373.1_00276.t1 atgcaaataaacangtctccaggacaaggatattggtgggagttcgatcgacttttcaatagaaactcatcttcttgctt gaaaggatttgatggcgactgcccatgtaaatttgatgcaaagcctggagtcaatacaagtgtcatggacgtcactatgt cttgcctcgttataaaaagcctgtgtgtaggtatagacctgtcacacatcaacaacatactggatataaggaataaagtt atacacgatagtaataccagtttagatgcaaatacttattacgactatatgaacaaggtcagggtagctatactttacct tgctaaccaagtatccaggtcactccacgatgaggtacttgaaaagatagacgagctgaattctcgtgtgctgaatgctc aggaattaggagaattacgaaacttaattgttgaccaaaagaggatagaagacttagagaagaaaatcggtgaccttgag gaaaaactgttaaaggacagcaacaaaacgattaaagatatagaaggaatgaccaaagacctgacacaaataaaagaaag tatggagcaaattatgcagttaaagggaagctttgataatatattgcaaagagtgactatgcttgaaacacagatgaaag cgaatcacgaagaaatggtccaaagtttgaggaagttgaaaaagagtaaagaaaccactgatcagtcatctcagacatca ccaatcatcaagagaattgaaggaaataaaaagagttcaaatcttcctcgtggacaaatagaaatcaacagagaggatca tggggataatgataccagaccatttcagtctcctaaattactttattctaatcaagatgtgattctatattcccgagatg aggaaccggaaattaggagactaaaacagaggcttttagaaaagaacaaatatgaaacaaaagtggtaccattatcagct ctacaagaacgaggaagagaattgccgatagaactccttcttgcacaagttattatccgagatgatcacacatatggaga aatggggcgcagttattcacacttaaagagagaagtaaaagatccaaatgatattttcgtgatgaatggcaaagaagtga ggaacgtatacatgttaggtgatgcagcgcatggcaagacaacattctgtatatggctcgttaggaattggtgcaatgct caacacgggtgtattcaggagattgaaatcctagataaatgggaaacatctttaaaaatatatgactttgtttttctact taagttccgtaatgtgaatccaaatagagcttctgttgtagatatgatatgtcaggacgtattcggaatagacaagggtt atcatgccaccatacgccatatattatcttccgacaaatatagaagtttaattatcatggacggccttgacgagtggaat ccaaatgacgaagccagaaaacagctgacgtgtcaaggaatgcctaatatagaagatttggcaagtactgtaacatgttt cttctcaatgcgaccatggacatttgcagctatatcaaaaatggtgaaaatgaatgacagagttgtagaaatctgcggtc tgagtgagtctggaatgaaaattgttatgaaaaatgtattgctcaattattatcatttgaatgactcttctgtaaaatac aatgatgtattcaaaagaatgaaaatgaatctaaaacaaaatactttaaaatcattcatgcaaatccctttattagctgt agtttgtgtacagatatggtatgagggtaaacaggttggggacagtctgacaagcttctatgcttcaatgttagacatgt tgatagagagagggagttataaacataatcttcaaataataaatgagagtgattgtgaattacctgatatcctgtcagaa catgaaaacattaaaaaaatgtactccgtcttgttaaaatttgggaaagtagcatatgaaggcctgttatctaatgaaat aaacctagtatttcagaaaagaaaattagaaaaagaaataggagtgacagagttacagtttgcactagatattggattga tcagtcagaaggaagcacccagcctcttaacaaagaatgtaagtgtccatttcttccataaatccttacaagagttcttg gctgtaatctacattgtaacaaacaaagaggtaggtgactcattctgtgaacatctgtctcgtgtcgaggtcatcatgga attatctaatgttattatgtttatatgtggtatgtgtccgtcccttggaagtattatatcacagcacgttgtaagtgtaa cagacagtgacatagagatctgtgaatacagaagatcacttgagctaggtaacactacagtggaagaactgtacaaactg caagtaagttggtacagggagttacaagacagaaaaacaggcagcccagtgacattccatgtttcggatgtttatgtgcg ggatagtagtgacatggagacagtgaagttgactagagaactcctgtctgatccccatgttgcagacataaggtcgctgt cattagatcgtgtacctactaacgttggaagtggtatcacatgtaatgaattaaatgatttcctgactaatacagaccac acaaggtctcttaccatggtctatattgacggcaagtacacttttagatctatacggaccatctgtataccttcattagt gaccttatatctaggctatgtgacaatagacaaaacttgtcttgatacctctgtccgctcccagctactgtctaacgttt catccttacgtaagttatggcttgttggcctaaccgtttgtgacggagaatttctggacctaagtcctgacatgatcaaa attgagcgtttaacgttattgaatttacatatgacagcagaagattgggggaaatttatttggactcttttagactatca tcatattctagattgtaaattagtatcaaccaatattgatgatgaatcagtgggaattatcacttcaaatgcaaggtttg aaataagtcaggagagtaattatgtacgatttacaagattacggtccgtttcaaatggcatggcaatcgatgaagaaatc cttcattgcatcgatgataacattgaagaagaagaggaagaagatgaagaagaagaatcccaccttcaggacggtcagtt tagtaatattccacatattaatggttgcaaagtaaccgaaaaccaacgttcgaagggttctgatttagtgaaaccagttt tcatgagcgaaagagagggccttgaatctgaaactaaaatctcatcaaagaggatcactcgccaagagatctttctcgct atgaatgatctcgtaacggccgatcacattcgcggtatagagcgcacagggaaactctggcgattgcatgtcgaaacaaa cgatgatcgcaacactttactgacatcgggcatcaacataagaagcaaacatgtgtctttgatgccagaaaacccgcgta agaagcgtagaagacgtgacacgaccacaactttgaaagtgtttgatgtcccgttatcggtggatgaccaacgaatcaaa ggatcaattgaaagggagggatgtgtcgtcttagatttgtatagagaaaaactaaaagtgaagacaggtagagaaaattt accgtccagttcaacaaattgtgatacaggaacaagaatcattattgtccgcaagctaaaatctcatttgccgcgtatat tgtccgtcggtaaacatacggcgtcaattcggtatgacggacagccaaattatgagggcgctctcagtcgccattcatat gaaattgaaaatgacagcgattcggatgaatcaaacatgattgcgcgccagacaaaggggttcttatcgttgtgttgttg cttcagtagaaatgatgacactaattccgatgaaaatgcggatatcacatcatga |
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Protein
| Protein ID | pfu_aug1.0_373.1_00276.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_373.1_00276.t1 MQINXSPGQGYWWEFDRLFNRNSSSCLKGFDGDCPCKFDAKPGVNTSVMDVTMSCLVIKSLCVGIDLSHINNILDIRNKV IHDSNTSLDANTYYDYMNKVRVAILYLANQVSRSLHDEVLEKIDELNSRVLNAQELGELRNLIVDQKRIEDLEKKIGDLE EKLLKDSNKTIKDIEGMTKDLTQIKESMEQIMQLKGSFDNILQRVTMLETQMKANHEEMVQSLRKLKKSKETTDQSSQTS PIIKRIEGNKKSSNLPRGQIEINREDHGDNDTRPFQSPKLLYSNQDVILYSRDEEPEIRRLKQRLLEKNKYETKVVPLSA LQERGRELPIELLLAQVIIRDDHTYGEMGRSYSHLKREVKDPNDIFVMNGKEVRNVYMLGDAAHGKTTFCIWLVRNWCNA QHGCIQEIEILDKWETSLKIYDFVFLLKFRNVNPNRASVVDMICQDVFGIDKGYHATIRHILSSDKYRSLIIMDGLDEWN PNDEARKQLTCQGMPNIEDLASTVTCFFSMRPWTFAAISKMVKMNDRVVEICGLSESGMKIVMKNVLLNYYHLNDSSVKY NDVFKRMKMNLKQNTLKSFMQIPLLAVVCVQIWYEGKQVGDSLTSFYASMLDMLIERGSYKHNLQIINESDCELPDILSE HENIKKMYSVLLKFGKVAYEGLLSNEINLVFQKRKLEKEIGVTELQFALDIGLISQKEAPSLLTKNVSVHFFHKSLQEFL AVIYIVTNKEVGDSFCEHLSRVEVIMELSNVIMFICGMCPSLGSIISQHVVSVTDSDIEICEYRRSLELGNTTVEELYKL QVSWYRELQDRKTGSPVTFHVSDVYVRDSSDMETVKLTRELLSDPHVADIRSLSLDRVPTNVGSGITCNELNDFLTNTDH TRSLTMVYIDGKYTFRSIRTICIPSLVTLYLGYVTIDKTCLDTSVRSQLLSNVSSLRKLWLVGLTVCDGEFLDLSPDMIK IERLTLLNLHMTAEDWGKFIWTLLDYHHILDCKLVSTNIDDESVGIITSNARFEISQESNYVRFTRLRSVSNGMAIDEEI LHCIDDNIEEEEEEDEEEESHLQDGQFSNIPHINGCKVTENQRSKGSDLVKPVFMSEREGLESETKISSKRITRQEIFLA MNDLVTADHIRGIERTGKLWRLHVETNDDRNTLLTSGINIRSKHVSLMPENPRKKRRRRDTTTTLKVFDVPLSVDDQRIK GSIEREGCVVLDLYREKLKVKTGRENLPSSSTNCDTGTRIIIVRKLKSHLPRILSVGKHTASIRYDGQPNYEGALSRHSY EIENDSDSDESNMIARQTKGFLSLCCCFSRNDDTNSDENADITS |
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