Gene
| Gene Model ID | pfu_aug1.0_3732.1_59320 |
|---|---|
| Locus | scaffold3732.1 : 1 ... 3905 : + |
| To GenomeBrowser | scaffold3732.1:1..3905 |
| Genes list of scaffold | scaffold3732.1 |
| Synonym | NA |
Manual annotation
| Study field | Biomineralization |
|---|---|
| Gene name | Pfu-000058 |
| Description | NCBI blastx best hit to XP_002934094.1.This gene contains VWD domain. |
| mRNA evidence |
| Study field | Biomineralization |
|---|---|
| Gene name | Pfu-000058 |
| Description | NCBI blastx best hit to EHJ76075.1. This gene contains VWD domain. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3732.1_59320.t1 | 2 | 1 | VWD | 4 | 45 | 8.2e-06 | 26.0 | 8.7e-10 | 1.3e-05 | 25.4 |
| pfu_aug1.0_3732.1_59320.t1 | 2 | 2 | VWD | 117 | 130 | 8.2e-06 | 26.0 | 0.16 | 2400.0 | -1.5 |
Transcript
| Transcript ID | pfu_aug1.0_3732.1_59320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3732.1_59320.t1 caaagtgtggtgtgtcattgctttgggatggaaaatctagcgctgttctcatggtaccagaaagcttcgctccaaatatg gagggcttgtgcggagattgtaaccagaagcaggatgatctgcgcacaaaagaggggaaggttatcggtacaacatggaa gagagatcatagatttataggagatagctatcaagtaccagacgattctgactctcccgaaacaactcggacaaagtgca gggatgaccaagttttggcatacgataccagttgtccatcaacatgtgtaacagaagatgtcgaggcttcagaatcctgt acacccattctagaatgtcattgtaagaaaggaactattgacgaaaacggcaaatgcgtgtcaaaatgtgggaagtacgt ggatggccaatacataccggccagtggcggtgttatgcaagatgattgcaagaagatacattttctcgacacaaatggag aattggtaaccaaggacctccaatgtgatatcaactacaagaaatgcggcgagaatcattgcattgtctcctga |
|
Protein
| Protein ID | pfu_aug1.0_3732.1_59320.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3732.1_59320.t1 KCGVSLLWDGKSSAVLMVPESFAPNMEGLCGDCNQKQDDLRTKEGKVIGTTWKRDHRFIGDSYQVPDDSDSPETTRTKCR DDQVLAYDTSCPSTCVTEDVEASESCTPILECHCKKGTIDENGKCVSKCGKYVDGQYIPASGGVMQDDCKKIHFLDTNGE LVTKDLQCDINYKKCGENHCIVS |
|