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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3737.1_16177
Locus scaffold3737.1 : 33648 ... 44935 : -
To GenomeBrowser scaffold3737.1:33648..44935
Genes list of scaffold scaffold3737.1
Synonym pfu_aug2.0_3973.1_12556

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_3737.1_16177.t1 gi|72134753|ref|XP_798362.1| PREDICTED: targeting protein for Xklp2 homolog [Strongylocentrotus purpuratus] 1.0e-26

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues
maleGonad 1

Transcript
Transcript IDpfu_aug1.0_3737.1_16177.t1
Definition-
>pfu_aug1.0_3737.1_16177.t1
atgaaccaattgtcgccgacaatcgattgtcgattgctaaaactctttcgattccgattatcgatttcattttcttgcaa
tcgattgtcgctgaaagaaaggtcccagccaattaaacctgtaacttcaatcggagacgcctctaaatcgactgaccaga
gttcaagatcaagagccggagaacgtcatgaaaggaacaactccacggaaaaagtatcggttaaacatacaaggtctgca
tccctcagacgagctcactccattgaacgtttgaaccaagctcaacgaggcagaactctaggagtgaagagtcctgtaaa
taacgaactgagtcacaagaaccacagacgctctggcagtaacgttccaattaaacgtgcagagtccattgaaaaactga
acacaccaagaactaggtcacaatcacttaaacgtacacattcaacagactctgaagacaacagaacctcaaaagctgca
cgaatttctaggtctgcatcagttagaagcttggacacaagtgcaggacaaagacccagatctgattcagcatcatccgt
gcgttctaatgtatcggagggtaaatcggatggacctacgtataagatgccaaaactaaccataccttcaactccgacgt
ttatgaaacgaaaaccaatgagcaaacccgaccgtgtgatgaacgcagaggagaaggagctagaagagattgcccacatg
cgtaaggagctggccaaaaaacgtgcaatgtcacaaaagtcttatcagaaagctatgacgtcatcaggttacgtacctca
ccactccaagaaagagccgacaatgcctgtggacattcacttcagcacagacgccaggatcaaggcacagccggtagtac
cgaatgagaaaccagcagattttacacgtagcctgcggtcttcaagtaaagaaccccccgctcctccacagaacaaagcc
ttaacacgcccggaaccattcgcattatcagagagcagaaaacgtaaagtagaacctgaatcacaaacttctaacggctt
caaatccatggcagaaaatgtacaagctttccatcgacaaacacccgagagattcagatcaaaagtagtgggtccgccac
agcgttgtactcgtggtaaatcacaaggagatcttacgatacctaaaacaccacaactagagactcgcagtcgtactcgt
caggtccacgtaccgagtcagaaagagctggaggagcaagagatagaggagatgaaaaagtaa

Protein
Protein IDpfu_aug1.0_3737.1_16177.t1
Definition-
>pfu_aug1.0_3737.1_16177.t1
MNQLSPTIDCRLLKLFRFRLSISFSCNRLSLKERSQPIKPVTSIGDASKSTDQSSRSRAGERHERNNSTEKVSVKHTRSA
SLRRAHSIERLNQAQRGRTLGVKSPVNNELSHKNHRRSGSNVPIKRAESIEKLNTPRTRSQSLKRTHSTDSEDNRTSKAA
RISRSASVRSLDTSAGQRPRSDSASSVRSNVSEGKSDGPTYKMPKLTIPSTPTFMKRKPMSKPDRVMNAEEKELEEIAHM
RKELAKKRAMSQKSYQKAMTSSGYVPHHSKKEPTMPVDIHFSTDARIKAQPVVPNEKPADFTRSLRSSSKEPPAPPQNKA
LTRPEPFALSESRKRKVEPESQTSNGFKSMAENVQAFHRQTPERFRSKVVGPPQRCTRGKSQGDLTIPKTPQLETRSRTR
QVHVPSQKELEEQEIEEMKK

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