Gene
| Gene Model ID | pfu_aug1.0_374.1_29220 |
|---|---|
| Locus | scaffold374.1 : 51339 ... 58925 : - |
| To GenomeBrowser | scaffold374.1:51339..58925 |
| Genes list of scaffold | scaffold374.1 |
| Synonym | pfu_aug2.0_596.1_20954 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_374.1_29220.t1 | 1 | 1 | TLD | 21 | 172 | 1.8e-18 | 66.8 | 1.1e-21 | 3.3e-18 | 66.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_374.1_29220.t1 | gi|94733952|emb|CAK04349.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_374.1_29220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_374.1_29220.t1 atgaacgacaaggaaaaatcctcgctggaagaatggatagggaagaaatgtgattttaagctgctttataaaataagtcg ggatggttgctcgtcacagacattccatactatgtgtgacaaccaggggcctacggtaactgtggtgtataacatcaacc acagtgtctttggtggcttcacattccagaactggaacacttctggtgcatacgtcggcgaccaccaggcatttcttttc cgtttacgacagaatggtcaaagtaatatgaaacagtatccctttctagccaactcaaatggaaataaagctatatattg ccatctaaattatggtccaacgtttggaggtggtcatgacttatttaccttcaatcaaacaactgtccgaacaggaaatt gtttccagctaaacggacattgttatatagggaatacgtttgacagcaaaggcgacgatatatataacattactaatgga cacatgcaagtaacagacttggaagtgtacaaagtgactataaacgatgtcggcgcgggcaagtccagttttttcaactc tgtcacttctattttccgaggaaaactttcaagtcgggcatcaagtggtagtgcagaacacagcataacaacaacgtatc gcatgtacaccgtgcgccaccaaggtcagcctttcaacttccgactatgtgacacccgtggtatagaggatgatattggg ctagatagtcaagatatctgctacattctagatggaaacatctctgatcgctatcaattcaacccatcaattccgatatc aaaagaagccgctggttttatagaggagccaagacttaaggacaagatacactgtgttgtaatagtggtggatgccagta cattagatgtcatgtcagacaaaattacacaaagattaaaggacagtcaaatacggatgaatcagaaaggcattccacaa ataatattccttacgaaactggacaaagtttgcacggaagtggatcaagacgtatcaaatatgtacagaagtcctgcagt aaaggcagccgtggacaaagcagccgacatgtttggactgcctagatcgcacgtgcttcccgcgaaaaactacgagaaag aagacgacttgaatgttaatataaacattatcattctcagagctttgagaaggatgttggattttgctgacgacttcctt gaagaacaactggatcgtcttcagtgcgagaatttgcatgaaatgagcatcaaagattaa |
|
Protein
| Protein ID | pfu_aug1.0_374.1_29220.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_374.1_29220.t1 MNDKEKSSLEEWIGKKCDFKLLYKISRDGCSSQTFHTMCDNQGPTVTVVYNINHSVFGGFTFQNWNTSGAYVGDHQAFLF RLRQNGQSNMKQYPFLANSNGNKAIYCHLNYGPTFGGGHDLFTFNQTTVRTGNCFQLNGHCYIGNTFDSKGDDIYNITNG HMQVTDLEVYKVTINDVGAGKSSFFNSVTSIFRGKLSSRASSGSAEHSITTTYRMYTVRHQGQPFNFRLCDTRGIEDDIG LDSQDICYILDGNISDRYQFNPSIPISKEAAGFIEEPRLKDKIHCVVIVVDASTLDVMSDKITQRLKDSQIRMNQKGIPQ IIFLTKLDKVCTEVDQDVSNMYRSPAVKAAVDKAADMFGLPRSHVLPAKNYEKEDDLNVNINIIILRALRRMLDFADDFL EEQLDRLQCENLHEMSIKD |
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