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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_3747.1_08710
Locus scaffold3747.1 : 27109 ... 28215 : -
To GenomeBrowser scaffold3747.1:27109..28215
Genes list of scaffold scaffold3747.1
Synonym pfu_aug2.0_302.1_07319

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_3747.1_08710.t1 1 1 Peptidase_S64 87 150 9.1e-07 27.6 1.6e-10 2.4e-06 26.2

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
mantle 1

Transcript
Transcript IDpfu_aug1.0_3747.1_08710.t1
Definition-
>pfu_aug1.0_3747.1_08710.t1
atgtttggtcacttgggagaaaatcagttcattgcagtaacatctccacatgtgatagaaaaaggacagaaagcaattat
acgaaaagaaaatgatttcgttaaattaggtgaatgcatttggtcacctaaaagaggatttaatgaaatattctcttcaa
ttgacgacatcgcagtaataaaagttttagatagaaaagtaatccgtttcagagataatcgggaaattaagatttatgat
ggaactgtcaacctggaaaacaggagagtatttaaatatggtgcaacaacaaacagaacagaaggtcgagtctgtaagtc
gcagtataatcagttcatgactgaggctggaaagtcagtttgcttcataattgtgcaagaagtacatggtaaatcaaact
tttctgaaagaggagatagtggtgctgttgttttgacgaaagatggcacaaaatacgttgccataggaatggtttatggt
ggaataaacattccagaacttcctgaaaatatgacagctgctatacgccttgacgatgctcttgacagatttaaggatgc
aacgggacagacattgtcattttctagcttctga

Protein
Protein IDpfu_aug1.0_3747.1_08710.t1
Definition-
>pfu_aug1.0_3747.1_08710.t1
MFGHLGENQFIAVTSPHVIEKGQKAIIRKENDFVKLGECIWSPKRGFNEIFSSIDDIAVIKVLDRKVIRFRDNREIKIYD
GTVNLENRRVFKYGATTNRTEGRVCKSQYNQFMTEAGKSVCFIIVQEVHGKSNFSERGDSGAVVLTKDGTKYVAIGMVYG
GINIPELPENMTAAIRLDDALDRFKDATGQTLSFSSF

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