Gene
| Gene Model ID | pfu_aug1.0_376.1_07499 |
|---|---|
| Locus | scaffold376.1 : 89614 ... 129165 : - |
| To GenomeBrowser | scaffold376.1:89614..129165 |
| Genes list of scaffold | scaffold376.1 |
| Synonym | pfu_aug2.0_612.1_07722 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_376.1_07499.t1 | 3 | 1 | Sushi | 163 | 212 | 7.8e-14 | 51.7 | 1.9e-06 | 0.014 | 15.7 |
| pfu_aug1.0_376.1_07499.t1 | 3 | 2 | Sushi | 220 | 270 | 7.8e-14 | 51.7 | 2.6e-09 | 1.9e-05 | 24.8 |
| pfu_aug1.0_376.1_07499.t1 | 3 | 3 | Sushi | 279 | 332 | 7.8e-14 | 51.7 | 8.2e-08 | 0.00061 | 20.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_376.1_07499.t1 | gi|126334857|ref|XP_001374633.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1 [Monodelphis domestica] | 8.0e-18 |
Transcript
| Transcript ID | pfu_aug1.0_376.1_07499.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_376.1_07499.t1 atgttcaattttgtgctctttttttcgtgcgagaacatcgacggcgggatcttcattaacccattggctacatgtgccct cgggaacatttggtccaccagcagtgacaatcaccaaaacaaggattgtatgtccattaaccatcataaggatacactgg actgtcaattattttcctggaattccatgaatatcagccaatttgaaacaaaagacaactgcacacactacagctcccaa gatgatcctctgtctgctcataatgtagaaatatcacgatcgatcaacttcggtctgtcgtctcttcaacgcattcgaaa atttctgttattaaaatttctgaaaatttctaaatcaatgaagcatcttatcccaactatcctgcttcttctttcgaaca cagacaaatgtaacggagcgaaatgtgcggatcatcatacatgcgtggatatgctggatgggtcggattactgtgtgaga acagaatgtcctgaaccttcagcgccaagtaatgtgatcatatttcccggagagaacgtcatcggatccacacgtaacgt tcaatgtaacattgggtatctcaatgtaggtgttcccattacaattgaatgcttcgaggacagagcatggaccaactgga ctggctcttgtaagacatgcgatgaaccttacaacattacaaatgctgttatcagtgacggaaacgtaacagtaggaagt aacagggcgtatacctgtaacaccggtttcgaagacaacggggaatcccccttaattacatgcaatgaatctgccatgtg gacctcgacgttgttttcttgcacaatagttgattgtgggcctccgcctaatattccaaggacaaatagaggcagtactg gcacaacatatatggcctatgctatttacttctgtatatataacctttcagtgaaaggaaataataaaatcatctgcaat gcaaccggaaagtggtctactccgaatttcaattgtacggcaccttcaacagccattatagattttgaggatggagatct cttcaaaatggaccacgtatatggatatattatgtttgatacaatagaaataagtgtcgaggcaacaatctcagcaaatc atcatggagattcggcaattgactacatcaggttgtttgacgtcaagtgctaa |
|
Protein
| Protein ID | pfu_aug1.0_376.1_07499.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_376.1_07499.t1 MFNFVLFFSCENIDGGIFINPLATCALGNIWSTSSDNHQNKDCMSINHHKDTLDCQLFSWNSMNISQFETKDNCTHYSSQ DDPLSAHNVEISRSINFGLSSLQRIRKFLLLKFLKISKSMKHLIPTILLLLSNTDKCNGAKCADHHTCVDMLDGSDYCVR TECPEPSAPSNVIIFPGENVIGSTRNVQCNIGYLNVGVPITIECFEDRAWTNWTGSCKTCDEPYNITNAVISDGNVTVGS NRAYTCNTGFEDNGESPLITCNESAMWTSTLFSCTIVDCGPPPNIPRTNRGSTGTTYMAYAIYFCIYNLSVKGNNKIICN ATGKWSTPNFNCTAPSTAIIDFEDGDLFKMDHVYGYIMFDTIEISVEATISANHHGDSAIDYIRLFDVKC |
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