Gene
| Gene Model ID | pfu_aug1.0_37664.1_19639 |
|---|---|
| Locus | scaffold37664.1 : 1 ... 5215 : - |
| To GenomeBrowser | scaffold37664.1:1..5215 |
| Genes list of scaffold | scaffold37664.1 |
| Synonym | NA |
Manual annotation
| Study field | cell cycle |
|---|---|
| Gene name | cyclin dependent kinase 7-like |
| Description | NCBI BlastP best hit to Aedes aegypti cak1 [XP_001657865.1] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_37664.1_19639.t1 | 2 | 1 | Kinase-like | 3 | 49 | 5.9e-08 | 32.0 | 0.0018 | 6.7 | 5.5 |
| pfu_aug1.0_37664.1_19639.t1 | 1 | 1 | Pkinase | 8 | 234 | 0.0 | 220.9 | 0.0 | 0.0 | 220.6 |
| pfu_aug1.0_37664.1_19639.t1 | 1 | 1 | Pkinase_Tyr | 12 | 204 | 2.2e-30 | 105.6 | 6.9e-34 | 2.6e-30 | 105.3 |
| pfu_aug1.0_37664.1_19639.t1 | 2 | 2 | Kinase-like | 112 | 198 | 5.9e-08 | 32.0 | 2.6e-09 | 9.6e-06 | 24.7 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_37664.1_19639.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37664.1_19639.t1 atggatgaaaagcaaaaacgctatgaaaaaatagattttcttggagaaggacagtttgctactgtttacaaagccaaaga tgttgtgactggagatatagtggcagtcaaaaagatcaaagttggaactcggacagaagctgcagatggaataaacagga cagcattacgagagattaaacttcttcaggaattacatcacgagaatataatagggttattagatgtgtttggtcagcga tcaaatgtgagcttggtctttgactttatggacacagatctggagattgtgataaaggacaataaggtggtattgacacc aggacacattaaatcatacacggtacagacgttacaaggattggagtatctacatcaacactggattctacatagggata tgaagccaaataatctattgatcaatgaacaaggtgtcctaaaactaggtgattttggtctggccaaattctacggatct ccaactagaatttacacccatcaagttgttacaaggtggtaccggtgtccagagctgttatttggggccagacagtatgg tacaggagtagatatatgggctgtaggatgtatactggcagaactattactcagggtgcccttcctgccaggtgaatctg accttgatcagttgagtaggatatttcaggtgctaggtacaccatcagatgaggattggccgggaaattttgattga |
|
Protein
| Protein ID | pfu_aug1.0_37664.1_19639.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_37664.1_19639.t1 MDEKQKRYEKIDFLGEGQFATVYKAKDVVTGDIVAVKKIKVGTRTEAADGINRTALREIKLLQELHHENIIGLLDVFGQR SNVSLVFDFMDTDLEIVIKDNKVVLTPGHIKSYTVQTLQGLEYLHQHWILHRDMKPNNLLINEQGVLKLGDFGLAKFYGS PTRIYTHQVVTRWYRCPELLFGARQYGTGVDIWAVGCILAELLLRVPFLPGESDLDQLSRIFQVLGTPSDEDWPGNFD |
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