Gene
| Gene Model ID | pfu_aug1.0_3775.1_16191 |
|---|---|
| Locus | scaffold3775.1 : 2266 ... 25121 : + |
| To GenomeBrowser | scaffold3775.1:2266..25121 |
| Genes list of scaffold | scaffold3775.1 |
| Synonym | pfu_aug2.0_50.1_00123 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3775.1_16191.t1 | 1 | 1 | TAF8_C | 170 | 196 | 4.9e-07 | 29.6 | 1.1e-10 | 8.3e-07 | 28.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3775.1_16191.t1 | gi|291225372|ref|XP_002732682.1| | PREDICTED: transcription initiation factor TFIID subunit 8-like [Saccoglossus kowalevskii] | 9.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3775.1_16191.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3775.1_16191.t1 atggctgatagtgataatcaaattatcaagactcgctcgtcgggaagggctagaaaagctcctgtcacattcaccccatc aaaaaactctggaaatttggctagctatactcttaatcggaaaaaagctatccaaaagaagatagacgcgtcagaaccgt atgaaatatttagacatgaacttcaagtatttttggaggataaatctgacttaattgtcgagcatactcccaagtatagc accgaccgtagcatcgtggaagactcgtatggcatttatgatctgacagagctaggaaagtgttcccagggatatgctga gcttgcagggagaactgaagctatggtcactgatgtccttatggctcaagttgacatggggcagaatgttaacgagatac caatacatgcgaagaggcccaacaagtctgtttttctaccaccttcacatagccagcagccacaaactttgaagacatta caagcaggagagcgagcctcccacccatcccatatacctgatcatctacctcccttccctgatcctcatacatacgtcag aacattgtttaaagaggacgagatcgagcctccatggtataggaacgcaaataaacgggaaagggggggggtatatataa tttaa |
|
Protein
| Protein ID | pfu_aug1.0_3775.1_16191.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3775.1_16191.t1 MADSDNQIIKTRSSGRARKAPVTFTPSKNSGNLASYTLNRKKAIQKKIDASEPYEIFRHELQVFLEDKSDLIVEHTPKYS TDRSIVEDSYGIYDLTELGKCSQGYAELAGRTEAMVTDVLMAQVDMGQNVNEIPIHAKRPNKSVFLPPSHSQQPQTLKTL QAGERASHPSHIPDHLPPFPDPHTYVRTLFKEDEIEPPWYRNANKRERGGVYII |
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