Gene
| Gene Model ID | pfu_aug1.0_3775.1_16192 |
|---|---|
| Locus | scaffold3775.1 : 31476 ... 41271 : + |
| To GenomeBrowser | scaffold3775.1:31476..41271 |
| Genes list of scaffold | scaffold3775.1 |
| Synonym | pfu_aug2.0_101.1_03620 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3775.1_16192.t1 | 1 | 1 | RVT_1 | 119 | 265 | 1.1e-24 | 87.0 | 9.6e-29 | 1.4e-24 | 86.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3775.1_16192.t1 | gi|298715287|emb|CBJ27936.1| | Chromodomain-helicase-DNA-binding protein 8 [Ectocarpus siliculosus] | 9.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_3775.1_16192.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3775.1_16192.t1 atgcatacgcaggagtatatcgacgaaacgaaaaataagaaattgaaacgtgtaccatacgtagtagataagaaaagaac gccgcaggtacgaattagcaacgccttatacggcattgctgcaggattaaatcatacgggtgctgttttcccttacataa ggatcttctttaactcatttgtgtcacacttatgccctttgccgtgtggagctcgcgaaaaagttccccgcgaggggttt gacacttgcaagaaagtatatttggatgtctttatggtccacatacttgatgaaaatgcagagtttacaacctgttttga catgtttgaattcggaaaagatatgtatggaaaattccttctgtcggcgaaatcactgtatgaggaaacaagatgtgcag taaaacttaacaatgaaatgacaagtttcttctctgtggaccagggcgtgaagcaaggctgtaaggtctcgcccaccatg ttcgcaatctacgtcaatgatctggcgaatgacgtaaacgcattaaactgtggtgtgacgttcgataactctcagctttc gatattgctatatgcggacgacattgcgttgatctctccagatgaacactcacttcagcgcatgttagatgttgtacata catggtgccgtaaatggagaatgacggtgaataaagacaagacaaacattgttcattttcgtgtgacgggtactactaga tcatcgcactcgtttcattgtggggatatagcattatcgtatgagaaaaaataccgatatctagggctttggctggattt ctttcacagtatccgaacttag |
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Protein
| Protein ID | pfu_aug1.0_3775.1_16192.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3775.1_16192.t1 MHTQEYIDETKNKKLKRVPYVVDKKRTPQVRISNALYGIAAGLNHTGAVFPYIRIFFNSFVSHLCPLPCGAREKVPREGF DTCKKVYLDVFMVHILDENAEFTTCFDMFEFGKDMYGKFLLSAKSLYEETRCAVKLNNEMTSFFSVDQGVKQGCKVSPTM FAIYVNDLANDVNALNCGVTFDNSQLSILLYADDIALISPDEHSLQRMLDVVHTWCRKWRMTVNKDKTNIVHFRVTGTTR SSHSFHCGDIALSYEKKYRYLGLWLDFFHSIRT |
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