Gene
| Gene Model ID | pfu_aug1.0_3802.1_30538 |
|---|---|
| Locus | scaffold3802.1 : 13086 ... 33001 : + |
| To GenomeBrowser | scaffold3802.1:13086..33001 |
| Genes list of scaffold | scaffold3802.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3802.1_30538.t1 | 2 | 1 | Fibrinogen_C | 64 | 78 | 3.8e-24 | 85.5 | 0.21 | 3100.0 | -2.5 |
| pfu_aug1.0_3802.1_30538.t1 | 2 | 2 | Fibrinogen_C | 128 | 294 | 3.8e-24 | 85.5 | 2.6e-28 | 3.8e-24 | 85.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3802.1_30538.t1 | gi|260796611|ref|XP_002593298.1| | hypothetical protein BRAFLDRAFT_83845 [Branchiostoma floridae] | 2.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_3802.1_30538.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3802.1_30538.t1 atggatagggaaccattccgttattattacgaatattggagaattttagaaaaaatgaaaaatccatgtggggaacctta ccaacttgaaggtaccaatacaaccgtggtaacaaatcatcaacgcacagaatgccgagcactatacgactgtaagaatt catttgaaggacaaggggtagcacagaacgtttatgtaaaatgccatcgggacacatccaacattcattggacaaaaccg tacctaagttgtgttcaaggcaacctagatgttcacgaagcatccaatggtactatagctcggacccatggatcttcttt atctcatctgtgtcatgcttatgccctttgtcgtgtggagctcgcaaaaaagtttcccgcgagaggtttgaaaataattc aacaacgaacaagtggaatagaagatgattcatttgatcgagattggaataaatttaaaaccggatttggatcaattaat aatgactattggataggaaacgaaattatacataagatgacgaaaacccatgaccacgatctacttattttgctatggaa actcgagggcgaagagaattacacatggcaacaaactgcaagatataaaagcttcacaatcaaaggcaatgatgaaaagt acaaaatacaaattgcaggttatgaatatgaaaccagcgatgcaggagatgtaatgtcggatctgaatggatatgatttc tccaccaaagatcatgactcaacgacattaaagtgctcagtggcacaaaaggccggttggtggcataaaacttggtggca tgaaacctacatgtaccatgacaagaccaatacagagaaatgtactgaaggaggaaacgtcaatgcattgaaatggggtt caacgtatgacaagtcaatgattctgattagaccaaagatgtaa |
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Protein
| Protein ID | pfu_aug1.0_3802.1_30538.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3802.1_30538.t1 MDREPFRYYYEYWRILEKMKNPCGEPYQLEGTNTTVVTNHQRTECRALYDCKNSFEGQGVAQNVYVKCHRDTSNIHWTKP YLSCVQGNLDVHEASNGTIARTHGSSLSHLCHAYALCRVELAKKFPARGLKIIQQRTSGIEDDSFDRDWNKFKTGFGSIN NDYWIGNEIIHKMTKTHDHDLLILLWKLEGEENYTWQQTARYKSFTIKGNDEKYKIQIAGYEYETSDAGDVMSDLNGYDF STKDHDSTTLKCSVAQKAGWWHKTWWHETYMYHDKTNTEKCTEGGNVNALKWGSTYDKSMILIRPKM |
|