Gene
| Gene Model ID | pfu_aug1.0_38064.1_19657 |
|---|---|
| Locus | scaffold38064.1 : 1984 ... 6172 : - |
| To GenomeBrowser | scaffold38064.1:1984..6172 |
| Genes list of scaffold | scaffold38064.1 |
| Synonym | NA |
Manual annotation
| Study field | other |
|---|---|
| Gene name | calmodulin like |
| Description | Blast best hit to NCBI XP_790017 (Strongylocentrotus purpuratus) |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_38064.1_19657.t1 | 3 | 1 | EF-hand_1 | 1 | 15 | 4.6e-27 | 91.2 | 2.4e-05 | 0.027 | 13.7 |
| pfu_aug1.0_38064.1_19657.t1 | 2 | 1 | EF-hand_7 | 1 | 13 | 8.2e-24 | 83.5 | 0.013 | 14.0 | 5.8 |
| pfu_aug1.0_38064.1_19657.t1 | 2 | 1 | EF-hand_8 | 1 | 42 | 1.8e-23 | 81.8 | 1.8e-09 | 2.0e-06 | 27.2 |
| pfu_aug1.0_38064.1_19657.t1 | 3 | 1 | EF-hand_6 | 1 | 15 | 5.6e-18 | 63.1 | 0.0098 | 11.0 | 6.1 |
| pfu_aug1.0_38064.1_19657.t1 | 3 | 1 | EF-hand_5 | 2 | 13 | 8.3e-17 | 59.6 | 0.0052 | 6.0 | 6.4 |
| pfu_aug1.0_38064.1_19657.t1 | 2 | 1 | EF-hand_4 | 2 | 13 | 1.6e-06 | 27.8 | 0.29 | 330.0 | 1.0 |
| pfu_aug1.0_38064.1_19657.t1 | 2 | 2 | EF-hand_4 | 23 | 86 | 1.6e-06 | 27.8 | 6.1e-09 | 6.9e-06 | 25.7 |
| pfu_aug1.0_38064.1_19657.t1 | 3 | 2 | EF-hand_1 | 25 | 53 | 4.6e-27 | 91.2 | 1.7e-13 | 2.0e-10 | 39.2 |
| pfu_aug1.0_38064.1_19657.t1 | 3 | 2 | EF-hand_6 | 25 | 54 | 5.6e-18 | 63.1 | 4.9e-13 | 5.5e-10 | 38.2 |
| pfu_aug1.0_38064.1_19657.t1 | 2 | 2 | EF-hand_7 | 26 | 86 | 8.2e-24 | 83.5 | 1.0e-24 | 1.1e-21 | 76.6 |
| pfu_aug1.0_38064.1_19657.t1 | 3 | 2 | EF-hand_5 | 26 | 50 | 8.3e-17 | 59.6 | 1.5e-10 | 1.7e-07 | 30.2 |
| pfu_aug1.0_38064.1_19657.t1 | 2 | 2 | EF-hand_8 | 38 | 88 | 1.8e-23 | 81.8 | 2.6e-20 | 3.0e-17 | 61.9 |
| pfu_aug1.0_38064.1_19657.t1 | 3 | 3 | EF-hand_1 | 61 | 88 | 4.6e-27 | 91.2 | 3.2e-13 | 3.7e-10 | 38.3 |
| pfu_aug1.0_38064.1_19657.t1 | 3 | 3 | EF-hand_5 | 64 | 86 | 8.3e-17 | 59.6 | 2.8e-07 | 0.00032 | 19.8 |
| pfu_aug1.0_38064.1_19657.t1 | 3 | 3 | EF-hand_6 | 67 | 87 | 5.6e-18 | 63.1 | 6.0e-06 | 0.0069 | 16.1 |
Transcript
| Transcript ID | pfu_aug1.0_38064.1_19657.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38064.1_19657.t1 gaaatggtacaatcgacttcccagaattccttacaatgatgtcgagaaaaatgaaagaatctgactccgaagaggaaatt cgagaggcatttaaagtctttgataaagacggcaatggttttataagtgcagctgaactacgtcacgtgatgacaaatct cggagaaaaactcacggacgaggaggtagaagagatgatacgagaggcagacattgacggcgatggacaggttaattatg aagaatttgtcaaaatgatgacgtcgaagtga |
|
Protein
| Protein ID | pfu_aug1.0_38064.1_19657.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38064.1_19657.t1 NGTIDFPEFLTMMSRKMKESDSEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLTDEEVEEMIREADIDGDGQVNYE EFVKMMTSK |
|