Gene
| Gene Model ID | pfu_aug1.0_3809.1_30540 |
|---|---|
| Locus | scaffold3809.1 : 6566 ... 19126 : + |
| To GenomeBrowser | scaffold3809.1:6566..19126 |
| Genes list of scaffold | scaffold3809.1 |
| Synonym | pfu_aug2.0_3031.1_05728 |
Manual annotation
| Study field | other developmental genes |
|---|---|
| Gene name | latrophilin-like |
| Description | NCBI blastp hit to ref|XP_002740291.1|[Saccoglossus kowalevskii] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3809.1_30540.t1 | 1 | 1 | GPS | 1960 | 2004 | 2.6e-09 | 37.0 | 8.0e-13 | 5.9e-09 | 35.8 |
| pfu_aug1.0_3809.1_30540.t1 | 1 | 1 | 7tm_2 | 2021 | 2257 | 7.00649e-44 | 149.7 | 0.0 | 9.52883e-44 | 149.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3809.1_30540.t1 | gi|291240728|ref|XP_002740291.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| Dshape | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3809.1_30540.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3809.1_30540.t1 atgaaaagacttagtgatgatttccttaaacgaacaactaatccagtgatgggaaatttagcatcagacgttgatatccc cgatatggacacagaaaatattatggctctgtggaaccgaaggaatccaattagtaagctattaaaggacaaaaagaatg cttctccaactcaagttgcatttccaaaagaagaagcgaatagctggattcaaaaattccgaacaacagttggagaatca gaaaatgagcacgtccctacgcaaattcctctgatccaaggtgctccagacttagacagtgaatcaacattcagctccat aaaaccctctagtctttcgtccaaaatagacaatacgaagaagcaacttttcatacataacgatgacgacaaacaaatta acgtcaaaacggtttcaaaaccagaacaggacagggatggaatacttgaaactgaatggcaaagtgaaagagataccaaa gagtcgggaccctcacctcccgaacccgactcactggctacagttatgcctcctccattaccgataaagatgatgttgaa aatgataaaagcaaatgtgtcaaccaaatcatataagcaacaaacacagaaaccaatgaataccagatcaattttaccag aaattctaaatacggatgaaaaagaaaaagacgatattcgggatgacagagacatacacgacaaagatgatttaaagaca tctatacggacagctgctgtcgatgaagaaaatataaaaccctcaaatcgtatgcctaaaattattacatctgataatgg aacaatgaacttacaagtcgagacgcacatagacaatataccaccccctacgatatcaactagcatggaaaaacttggag tagacataccgttacaacatcatgctgccgatgaatttacagatagcttagtcgacgacgacatgaaaagtaattcgact agtgatgatatagatggaggagtattccccaaagaaccgattgggatcgatgtaggcataccgtcaaatgaaactatcga cataatgcacaagatcgtcaaaacatcagcaattcatgatgatgaaatagatgataacagagaatttggaaatatagaga atctcattgagcgtgaaaaggtacctagcaataatacaaatgatgtcgcagtttctgacgactcgcacgatgatcagaga caagtgcaggcaccgcctactcccgaaatcaagaggaaattaataaggccgactaaggatactgtgatcttaacagatgt tgttgaagatgatgaggaagataagacagattcagatgaggacatagtgaaagctcatggtggaacagtagctgttcaga aaaataccgaaacggtaacagatgacgatgatgaactgctttcatctgaggaggacgaggatattgatgaatttacggat gataaagagctttcaacaactacggctttaggaaatactacaaccttaagtaccaatgaaacttcaacaggttcctcgct gatcaaaggttctgaagaagatatttttgatggagattttagcactgatgatatgaatcaaaacacgacgtatgctttat cttcaaatatcacaactacagcctctaatacagatacagatgaaattatatctgcatctgaagacgaattgcatagtgct gaagatgatgatgaagtttctgacacttccggaaaacctgacaattcaacagaattaacttcagttcctaaaacgcccct tagcactgtgaaaattgaaaatgatgacgaggcagtggatcatcacagtgcagagaaaacagaaaaggaagaggaagagg atgttactgaaaaaaataaacatcttaccaaagtcccagtttatgaagcgtcttctgattatgaattcagtgaacctaag atgttaacagagactcaaaaatcacatgaagatgattcaagttcagaaaaagactctgatccgaacagtccatctgtctt tgaagcaaaacctccccgtagtgagaaagacaaatttactataaggggtaaaagtgaagagactgcatttgagccagacg atgaacattcagatacaaaagaggatacgactgagtattcgacaaccccaattccagtaattcttgttccaccaccacct ataccaaacgatagagaaatagatgaatcgaacgaagtaattgaagaagctaaaacgaatctaagtcctatgacgaaaaa agaagatactaatgacgatgacaaagatgactatgtggagaatggaaaagatgatgacggtttgatcgctaggaaaaatg atgacaaaactactataggtataacaaaatcttctatcaagaattcatcaaagggggatgtaagcagagaaactaaatac agcaatgaaaaagaagactcaaatgaggtaacagaaaatgaagatagcaagcacacagacgaaacaaaagttttgacatc ttcaacttcaaaaccttatgttgaaagctcttacgatatggatgattctgcagaaaatgacaatatagtatcaacatcag gagagaacaatgatgtctcgaattctaaagataacattatgccaatgagacccaaaagtgtaaatacaaatgaaacatca gattcgtctgaggaagagctggagagcactaaggttgatcccactaataaagagcaagattctaaagaggaagaactcga ggaaactgaaacaactagagaacgcattgaatctaaagttaaagacccaaacactgaaagtcacgaggaagacgacgaaa gcattgccacggaaaaagaggaaagcatggattcggagaatgaaagagagagaagtaacgataaaaatcaagtcgaaatt gaatcaagcgaggaaattgcagagaatggtacaacttcatcatttgaggggggaaatcttgttgattcttccgaggagga cgtgtcttcttttctgactgaggtggataataggtacacattaaccagcatgaaagagcaccagagctcagaagaggagg aggaaaacgaggagatagaggatagtaaagttatgaatgattcatctagtagtatccctaatattgtaactgacagttcc aaagaggattcatccaatgttgaagaagtatcagaggagataaatagtgaaattgaagagaaatatgacaatagaaatat gagtatatcgcaatttaatactacaaacgagatcgtagatgattccgaggagagcaatgaacatataactgaaaaagagg acgaaatgaattcaaattcgttctctcaaaatatgacaagtgatataaatgatgattctgatgagatcactgaagaaata gtggataaagaggaaattaaagatgataggcatatgaatgattattcatccgaaaagacagtggattctgaagaaccgaa ttctgaagaaaatgagaaagaagaattccaaaataaagatgaaaatttttcgagaagaaatatatccaatgcttcttacg aagacacaaaggaagtagaagatcacagtatggaggaaaaagaatataatgtgatggttaacaataattcactacatgca tcgaatgaagtggtagatgacgacaaatttatagatgaagtttcaaatgaattagaagagcatacccctcttcttcgtgt tacttcaaatgagcaaacggactcatcagaggaatatatgagaaacaatgatagtagagtcgaaatcactaatagtaaag aaaacttacgcaacagtttacaggatgatgaaatattgaaaagcgtagagagggaaagtgaggaggtaatcgaggacagt ggttggggtgaaaacatagacaactctccaaaagtgaaaatagagaaaaagagggaaagtggagagcaggttgaagattt tgaatatgcagatgaaaatgaatcacatttaagaagtgaggcagctgttcaagacgagtatcgccaagctgaggaacaag acctggaacctgctggtgacagccagtacgtgaatgatgatgtggagtatgaaccaaaggacggaaacgatggtggagag gaacaggatgatgagtggaacgatgacactaacgctgatatgaaaatgatcggaaaggcttcaatggagatggaggagtg tgataatacaatgtcatccatgtgttatagctaccccatcacagctgagaaaggagcatctacgtgtgacacagactggt atggtcacgtgttcatggacaagtgttaccgggctataaaggatatagacagaataccttacctgaactaccagtatgga accaaactctgtcaagcattgggaggcaggatagctgaaataagggacggattcggaggaaaatttatcatgcttaccct gctcaaaagcatgagagaattcaacatgcaaggtgaaccaccgggagtatgggtgaattctgaaccaataggaaccagct gtacaatgctaacaaggagcggacctctagcagtcagctgtgatactaataacatggcggttacaatatgtgagaaaacg gcaaccaatcccggattaactttagagcatgcaagcgatcaccaacacatgtcgtatcccgtatatttctattctgatga tgctaacaaagaacttacatgtggaataactggccatgcaaacgagttaccgacgctatggttcaaagatggtcgcctga ttgacatccgggtcaagaaaagacttgaaagcgtcttgccacaccaagggggaaggccgatttctccgcttccagaaccc gtttcctgtccacaaaccttacttaccgacactataactggtcacagtgcaactttcccgtcctctgccattggaatgaa agtagacagcttcgaaatttgtggtggagagagatctggacaagccttctgtactggcgacttctcatccggggcttact ggacagatgtccatatatggaaatcatgtggtcaatcccttccacctccaccaaacactgtcaacttaaaagatagtgat gaagttgatgatacagatgagaaagaagacgatgatagcaatgattatgatacacttgtgtctccaatgacaccagagga aagactgaaagaacttgctgagatgacagtgggagaggataacgttgagggagtgatggaggagacggctgatatcacag agagcgtggacgaccttaatgaactagacgtggagtatatagcggagatcatgaagaagacagctaatacagcaaggata ggaaaattcgttgctgccaaagctatgagaacagtcgacagggtcctctctatgcaccacaggagagctgtcaaatcaag gaaagctagccagattataaagaacttcgaaaaaatagccgaggatgctgagatagacgatgattctggacacttccgaa tggtgatgagtaacatcgctttggacgtgtaccagctccaccgtcataagagacccgtgctgggatttggcgctaaagct gcccagacaagacgaatggacagtgatttctctcctaaccggatcttcactatatacgaccagacggacatgtacagaga tgttgatgtcgccatacagcttcctccagatctaattgacgaagctactgcaggaaaaagaagattatttatgatggtat acaagaaagggaacctcttccaagatgattctattccaattaacgtgagcggtaaagtcaatgtagatgggggacacgac ctcaaacttatcaacagctacgtcatttccgctagccttggcggaaaaaagatccagggattgtctaataaagtgaaaac tatttatagacctttaactaatcctgatggcagtcagagaacgtgtgctttttatgactttgccatgaataatctgtctg gaggatggtcttctgctggatgtgtattcaatggaaccagtaacggacgtgaaatctgtctctgtgatcacctgaccaat tttgcagtgcttattgatttctatggtcagaggaagcctgtggagcgggaacacgaggaaactttgtctataatatcact tattggtctcagtctctctatacttggactgtctctcacaattatatcatatttattcttcaggaagttgcgccaaggac gtgcgcaacagaccttgtttaacctcgctctggcgatgttattttcatgggtggtattcctggttggcatcaaacagacc taccactacataggctgcctgattgtggctgccctcctacattacttcatcctagcctccttcatgtggatgctaatgga ggcgtttcttcagtaccttacatttgtaaaagtactaggtacctatgtcaggcgatataccctaaagtcagtgctggttg cctggggtttacccgccgtgcctgtgatcagtgtattgagcatagattacacactatacaaaggaggcgatcaatactgt tggatgtcattggatgccttttactatgctttcgctataccggtaggagtaatcattctcagcaaccttattgttttcgt catcacggtcgtcagtatctatagacggcctgcaggactccgcagtaaccaatcaaaacacaagatggccataacgaatc tacaggctgccataacaagctttgtgctactaggattatcttggatactgggttactttgcaatctcggatgctaggctt ccctttcactatgccttcacaattttaaattccctccaaggattttttattttcgtgatatttgttgtacgaaagaaaca agtacgagaccaatggctgatagcgtgttgctgcaagacaccggagcagcagaaggcccagaggtcgctgtcggcttccg cttccattcccagcacgtgcagtgccaaaagcacgcgcagcagttctagtacgtcatcgctgcagcagagaagtcgtccg gaccgatcagacagttgtcagacgacaacgagctttattagtgctgaatacgactcgatctatgctttgccttactccaa agtgtctcgagattctttgtattatagaaaattttga |
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Protein
| Protein ID | pfu_aug1.0_3809.1_30540.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3809.1_30540.t1 MKRLSDDFLKRTTNPVMGNLASDVDIPDMDTENIMALWNRRNPISKLLKDKKNASPTQVAFPKEEANSWIQKFRTTVGES ENEHVPTQIPLIQGAPDLDSESTFSSIKPSSLSSKIDNTKKQLFIHNDDDKQINVKTVSKPEQDRDGILETEWQSERDTK ESGPSPPEPDSLATVMPPPLPIKMMLKMIKANVSTKSYKQQTQKPMNTRSILPEILNTDEKEKDDIRDDRDIHDKDDLKT SIRTAAVDEENIKPSNRMPKIITSDNGTMNLQVETHIDNIPPPTISTSMEKLGVDIPLQHHAADEFTDSLVDDDMKSNST SDDIDGGVFPKEPIGIDVGIPSNETIDIMHKIVKTSAIHDDEIDDNREFGNIENLIEREKVPSNNTNDVAVSDDSHDDQR QVQAPPTPEIKRKLIRPTKDTVILTDVVEDDEEDKTDSDEDIVKAHGGTVAVQKNTETVTDDDDELLSSEEDEDIDEFTD DKELSTTTALGNTTTLSTNETSTGSSLIKGSEEDIFDGDFSTDDMNQNTTYALSSNITTTASNTDTDEIISASEDELHSA EDDDEVSDTSGKPDNSTELTSVPKTPLSTVKIENDDEAVDHHSAEKTEKEEEEDVTEKNKHLTKVPVYEASSDYEFSEPK MLTETQKSHEDDSSSEKDSDPNSPSVFEAKPPRSEKDKFTIRGKSEETAFEPDDEHSDTKEDTTEYSTTPIPVILVPPPP IPNDREIDESNEVIEEAKTNLSPMTKKEDTNDDDKDDYVENGKDDDGLIARKNDDKTTIGITKSSIKNSSKGDVSRETKY SNEKEDSNEVTENEDSKHTDETKVLTSSTSKPYVESSYDMDDSAENDNIVSTSGENNDVSNSKDNIMPMRPKSVNTNETS DSSEEELESTKVDPTNKEQDSKEEELEETETTRERIESKVKDPNTESHEEDDESIATEKEESMDSENERERSNDKNQVEI ESSEEIAENGTTSSFEGGNLVDSSEEDVSSFLTEVDNRYTLTSMKEHQSSEEEEENEEIEDSKVMNDSSSSIPNIVTDSS KEDSSNVEEVSEEINSEIEEKYDNRNMSISQFNTTNEIVDDSEESNEHITEKEDEMNSNSFSQNMTSDINDDSDEITEEI VDKEEIKDDRHMNDYSSEKTVDSEEPNSEENEKEEFQNKDENFSRRNISNASYEDTKEVEDHSMEEKEYNVMVNNNSLHA SNEVVDDDKFIDEVSNELEEHTPLLRVTSNEQTDSSEEYMRNNDSRVEITNSKENLRNSLQDDEILKSVERESEEVIEDS GWGENIDNSPKVKIEKKRESGEQVEDFEYADENESHLRSEAAVQDEYRQAEEQDLEPAGDSQYVNDDVEYEPKDGNDGGE EQDDEWNDDTNADMKMIGKASMEMEECDNTMSSMCYSYPITAEKGASTCDTDWYGHVFMDKCYRAIKDIDRIPYLNYQYG TKLCQALGGRIAEIRDGFGGKFIMLTLLKSMREFNMQGEPPGVWVNSEPIGTSCTMLTRSGPLAVSCDTNNMAVTICEKT ATNPGLTLEHASDHQHMSYPVYFYSDDANKELTCGITGHANELPTLWFKDGRLIDIRVKKRLESVLPHQGGRPISPLPEP VSCPQTLLTDTITGHSATFPSSAIGMKVDSFEICGGERSGQAFCTGDFSSGAYWTDVHIWKSCGQSLPPPPNTVNLKDSD EVDDTDEKEDDDSNDYDTLVSPMTPEERLKELAEMTVGEDNVEGVMEETADITESVDDLNELDVEYIAEIMKKTANTARI GKFVAAKAMRTVDRVLSMHHRRAVKSRKASQIIKNFEKIAEDAEIDDDSGHFRMVMSNIALDVYQLHRHKRPVLGFGAKA AQTRRMDSDFSPNRIFTIYDQTDMYRDVDVAIQLPPDLIDEATAGKRRLFMMVYKKGNLFQDDSIPINVSGKVNVDGGHD LKLINSYVISASLGGKKIQGLSNKVKTIYRPLTNPDGSQRTCAFYDFAMNNLSGGWSSAGCVFNGTSNGREICLCDHLTN FAVLIDFYGQRKPVEREHEETLSIISLIGLSLSILGLSLTIISYLFFRKLRQGRAQQTLFNLALAMLFSWVVFLVGIKQT YHYIGCLIVAALLHYFILASFMWMLMEAFLQYLTFVKVLGTYVRRYTLKSVLVAWGLPAVPVISVLSIDYTLYKGGDQYC WMSLDAFYYAFAIPVGVIILSNLIVFVITVVSIYRRPAGLRSNQSKHKMAITNLQAAITSFVLLGLSWILGYFAISDARL PFHYAFTILNSLQGFFIFVIFVVRKKQVRDQWLIACCCKTPEQQKAQRSLSASASIPSTCSAKSTRSSSSTSSLQQRSRP DRSDSCQTTTSFISAEYDSIYALPYSKVSRDSLYYRKF |
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