Gene
| Gene Model ID | pfu_aug1.0_381.1_36516 |
|---|---|
| Locus | scaffold381.1 : 1 ... 19208 : + |
| To GenomeBrowser | scaffold381.1:1..19208 |
| Genes list of scaffold | scaffold381.1 |
| Synonym | pfu_aug2.0_86.1_20194 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_381.1_36516.t1 | 1 | 1 | Pribosyltran_N | 1 | 79 | 2.2e-33 | 114.4 | 2.5e-37 | 3.7e-33 | 113.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_381.1_36516.t1 | gi|148234472|ref|NP_001080655.1| | ribose-phosphate pyrophosphokinase 2 [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_381.1_36516.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_381.1_36516.t1 tgtggagataggggagtcagttcgaggagaggatgtgtacattgtccagagtggctgtgatgaagttaacgacatgctga tggaactacttataatgatcaacgcatgtaaaatcgcctccgcttgtcgtgtaacggcagtcattccgtgcttcccctat gccagacaggataaaaaagacaagagtcgagcccctatctcagccaagctagttgccaacatgttgtcagtagctggagc tgatcacatcatcaccatggatctccatgcttcacagatacagggcttctttgatatccctgtggacaatctttatgctg agccagcagtactgaagtggataaaggacactatcccagattggagaaatagctgtattgtatcgcctgatgctgggggc gcaaaacgtgtgtggatatatccatcattttggctgaagccgtcagacgaacgcacaacggagaatctgtctcctatctg tttagccatgtacctatgtaatgctcggaaacaatggaaatttctgtgtatataa |
|
Protein
| Protein ID | pfu_aug1.0_381.1_36516.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_381.1_36516.t1 VEIGESVRGEDVYIVQSGCDEVNDMLMELLIMINACKIASACRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGA DHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIKDTIPDWRNSCIVSPDAGGAKRVWIYPSFWLKPSDERTTENLSPIC LAMYLCNARKQWKFLCI |
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