Gene
| Gene Model ID | pfu_aug1.0_38159.1_12312 |
|---|---|
| Locus | scaffold38159.1 : 1 ... 3967 : + |
| To GenomeBrowser | scaffold38159.1:1..3967 |
| Genes list of scaffold | scaffold38159.1 |
| Synonym | pfu_aug2.0_54.1_13488 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_38159.1_12312.t1 | 1 | 1 | TFIIS_M | 46 | 122 | 7.2e-06 | 26.0 | 3.6e-09 | 1.3e-05 | 25.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_38159.1_12312.t1 | gi|260792918|ref|XP_002591461.1| | hypothetical protein BRAFLDRAFT_119264 [Branchiostoma floridae] | 1.0e-27 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_38159.1_12312.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38159.1_12312.t1 gtagagtgataaacaaattgagaagacatgaaaacgaggcagtacaaaaggcagctcagagagtttatgtaaaatggaaa actcacttcaaggaccacctggagaggccacagatagaggtcaaatgtgacctaaaaactgagaatatgaggaactcagc caaaaagatgttagctgatgctctgtcactagaggcatcgagtaccttgccagaggtgatagagagggaagtgttttacg tccataaacgtcttataaaccatgcttacagaaggaccatgagggcagtagtgtttgctttacggcacaatgaagacgtt aaaaatcaagtgttagacagttcatttacagtcagtgattttgtaaaaagttacgtgaaagattga |
|
Protein
| Protein ID | pfu_aug1.0_38159.1_12312.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38159.1_12312.t1 RVINKLRRHENEAVQKAAQRVYVKWKTHFKDHLERPQIEVKCDLKTENMRNSAKKMLADALSLEASSTLPEVIEREVFYV HKRLINHAYRRTMRAVVFALRHNEDVKNQVLDSSFTVSDFVKSYVKD |
|