Gene
| Gene Model ID | pfu_aug1.0_3816.1_01542 |
|---|---|
| Locus | scaffold3816.1 : 1 ... 2925 : - |
| To GenomeBrowser | scaffold3816.1:1..2925 |
| Genes list of scaffold | scaffold3816.1 |
| Synonym | pfu_aug2.0_1314.1_14958 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3816.1_01542.t1 | 1 | 1 | MutS_I | 149 | 183 | 2.6e-09 | 37.0 | 1.2e-12 | 6.2e-09 | 35.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3816.1_01542.t1 | gi|114599394|ref|XP_001134751.1| | PREDICTED: DNA mismatch repair protein Msh3 [Pan troglodytes] | 3.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_3816.1_01542.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3816.1_01542.t1 atgagtccagattctagatcagctaagaaatcatgtcctccctccaatacagataatgcaacaaaagatttaggcagcac cagtggaacatctagtacgaaagatgacattcaaagtgatactgggactgacagaaagttgtctgagaaaacaactagga aacttctacaataccagtccaatgcaaattctgaactggaggtaaaagagtgcaaacacatccctttaagccatttaatt aaggcaaggcaaggagatgatagggaggataaacatatgtgcttgggtgtagataacaatggaaaagatgccgactccga ttgtgaaattatagatgacatcagtaaaccttctgcatcatcatcatccactccaacactgagaaaatttactaacagta aaagtaaattggaagcactgaacaagaggactaaaactaaatacacacctctggaacagcagtatgtggaaatcaaagga aaacatccaggtgcagttttattgattgagtgtggttataagtatagattcttcggtgaagacgcagag |
|
Protein
| Protein ID | pfu_aug1.0_3816.1_01542.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3816.1_01542.t1 MSPDSRSAKKSCPPSNTDNATKDLGSTSGTSSTKDDIQSDTGTDRKLSEKTTRKLLQYQSNANSELEVKECKHIPLSHLI KARQGDDREDKHMCLGVDNNGKDADSDCEIIDDISKPSASSSSTPTLRKFTNSKSKLEALNKRTKTKYTPLEQQYVEIKG KHPGAVLLIECGYKYRFFGEDAE |
|