Gene
| Gene Model ID | pfu_aug1.0_38179.1_34051 |
|---|---|
| Locus | scaffold38179.1 : 1 ... 3635 : - |
| To GenomeBrowser | scaffold38179.1:1..3635 |
| Genes list of scaffold | scaffold38179.1 |
| Synonym | pfu_aug2.0_2718.1_28914 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_38179.1_34051.t1 | 1 | 1 | RVT_1 | 816 | 944 | 2.4e-16 | 59.7 | 1.1e-19 | 5.2e-16 | 58.6 |
Transcript
| Transcript ID | pfu_aug1.0_38179.1_34051.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38179.1_34051.t1 atgttaaaaccagttcgtaacgggcaagaacggaattttgaaaatgaaatttcacaagaaagttccgtatcttctgatag gaataatgttcctactggtcgttttagtccgaatagatttaaattccaaaacaggtcccatgatgaatttgtcgatttct caaatgaacaacatgttcatattcctggaaattctaggagtgatccacaagtatatagatactttcaagaacctcacaat tcattcagagaggcagatgcacattcgttatccggtagttccgtttcttacgtcactttggataggtataacgaaactga agatacaaattttgcacgtaatttccattcaaactacaatcgtggtttcagaacagaggattctgcttcgcacacgcgtc ttcaagagtcacaaaatgtacacacggatacaaatagacctctgtttatcaacagaaacatacaaaataactgcgactca aacttttccctcgctgtaaactctcattcaaacggaaatcgaatgtcccgtgatagcggttcagtttacgtagaaaatat gtatccggaacaaaacggaattccacttaacaccgccgagagatatagaatgaatgaagggagaccaaatatacatacag gagtatatccataccgcaatgacgaattttcggagcatcaaggaaaacattattttcctagtttagccgaacgacaacaa ataccgactcctgaattccaaccggtttctaatggaaataatgctcgcataccgaacaattttgctccacatagtagata tgtagatcaaatacacgaaagacccgcgagaaacgatagaattcgtcatatgaccgaaacgcgcccagttaacagaaaac ttaaaaatcctgacacatatgacggtcaaaatgttgagtggaaagattacatttgtcattttgagcaagtttcacaatgg aacatgtggagtgaaaatgatatggctgctcaattagccatgagtttgcgcggaaatgcacagaggcttcttagcgagtt gaccgctgtcgaactttcgaattattttcaattaaaacaggcgctaacaaagaggttttgtccacctgaacgcgagatcg cctacaggtgcgagtttcgaaatagaaagagaaaggaaaaggagtctgtagcggactttggatacgcactacggcgacta tcatcacttgcgtttccgagtttacctacgtatgcccgagagagcatgcttatagagcaatacatttccggattaggtaa tcaggaattgagacgacatgtgcagtttgcacatccgcaatcgttcgataaggcaatatcccttgccttagaatttgaag cttttgaaggagttcaattcggttcaaggaaaccgatcaacggtgacgcgttacaagtaagaggtatatcgcacgcgacc ggaagtacagatgaaaccgtccgagaactgataacaactgtcgaaaatctaagccgttcaattaagaatctgactacaaa ttcgacacaacacgtgtcaacgaaaggaaaaagaaaaaacttacttgttactcatgcggggaggaaggccatattagccg aaattgtccaaacagagaaagaaaaaacggagagcaaacttggcgaccagatatttgcacactctgtgatggtggcagag ttaggagaatttccaggtggtatacttggacttgattttcttgctgaacaaagaatattgatagacactagtgcgggaat tatgaaatcatcgctgtttgaattacagctccataaagaaaaacctgtcaataaatgcgccaaagttcatcttaacactc cgattacaataccctcaaagaccgaaatttatacaaaatgcaaaattgtaggacattttccgaaccaaacagaaggcatt attgagccttttaaggattttcaaggagaacatcaagttctcgttccgaaatcagtagtttgtccatctgatgcgggagt tataatttcaattttaaatccaacgcaatatcctgtccagttacacgagaacttagagatagccaccattcaacaggttg aatgcgtggtaaattccgtatcaaaagagaagtactttcccgagaagcagacttccgctttaccagaacatttagcacca ctgtttgagaattcttcgaagaagctcaatgaggacgagaagaatgaacttaaggagacaatattacaatattcggacat ttttgttggtccgaacaatgcccttggacaaacggacattgtaaagcataggattgacgttggcgatgctaagctaataa aattgccgcctcgcagattaccaattcatcaaagggaagatgcagaacaagaaataaacagcatgttggagaatggaata attgagaacagcaatagcccgtgggcttcacccattgtactggcaaaaaagaaggacggaacaacgcgtttttgcgttga ttatcgtaaattaaattcagttaccatcaaagatgcctatccgttaccgaaaatagatgaatcaataagttcactctcag gcgccaaatacttttgtactttggacctagcaagtggattctggcaagttgccatggatgaggaagacaaaaagtacacc gctttcacgacacacaaggggctcttccaattcaaagtgatgccatttgggctatccaatagcccagccacattcgaacg cctcatggaaattgctttaaatggactccaatgggaaagatgtctcgtctatctagacgacgtaattgtattcgggaaaa atttcaaggagaccatcttcaacctaaagctagtctttgaaagattcaaatcagcaaattt |
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Protein
| Protein ID | pfu_aug1.0_38179.1_34051.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38179.1_34051.t1 MLKPVRNGQERNFENEISQESSVSSDRNNVPTGRFSPNRFKFQNRSHDEFVDFSNEQHVHIPGNSRSDPQVYRYFQEPHN SFREADAHSLSGSSVSYVTLDRYNETEDTNFARNFHSNYNRGFRTEDSASHTRLQESQNVHTDTNRPLFINRNIQNNCDS NFSLAVNSHSNGNRMSRDSGSVYVENMYPEQNGIPLNTAERYRMNEGRPNIHTGVYPYRNDEFSEHQGKHYFPSLAERQQ IPTPEFQPVSNGNNARIPNNFAPHSRYVDQIHERPARNDRIRHMTETRPVNRKLKNPDTYDGQNVEWKDYICHFEQVSQW NMWSENDMAAQLAMSLRGNAQRLLSELTAVELSNYFQLKQALTKRFCPPEREIAYRCEFRNRKRKEKESVADFGYALRRL SSLAFPSLPTYARESMLIEQYISGLGNQELRRHVQFAHPQSFDKAISLALEFEAFEGVQFGSRKPINGDALQVRGISHAT GSTDETVRELITTVENLSRSIKNLTTNSTQHVSTKGKRKNLLVTHAGRKAILAEIVQTEKEKTESKLGDQIFAHSVMVAE LGEFPGGILGLDFLAEQRILIDTSAGIMKSSLFELQLHKEKPVNKCAKVHLNTPITIPSKTEIYTKCKIVGHFPNQTEGI IEPFKDFQGEHQVLVPKSVVCPSDAGVIISILNPTQYPVQLHENLEIATIQQVECVVNSVSKEKYFPEKQTSALPEHLAP LFENSSKKLNEDEKNELKETILQYSDIFVGPNNALGQTDIVKHRIDVGDAKLIKLPPRRLPIHQREDAEQEINSMLENGI IENSNSPWASPIVLAKKKDGTTRFCVDYRKLNSVTIKDAYPLPKIDESISSLSGAKYFCTLDLASGFWQVAMDEEDKKYT AFTTHKGLFQFKVMPFGLSNSPATFERLMEIALNGLQWERCLVYLDDVIVFGKNFKETIFNLKLVFERFKSAN |
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