Gene
| Gene Model ID | pfu_aug1.0_382.1_36523 |
|---|---|
| Locus | scaffold382.1 : 1 ... 22415 : - |
| To GenomeBrowser | scaffold382.1:1..22415 |
| Genes list of scaffold | scaffold382.1 |
| Synonym | pfu_aug2.0_773.1_11171 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_382.1_36523.t1 | 1 | 1 | tRNA-synt_1c | 3 | 276 | 0.0 | 226.1 | 0.0 | 0.0 | 225.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_382.1_36523.t1 | gi|198462849|ref|XP_001352579.2| | GA18268 [Drosophila pseudoobscura pseudoobscura] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_382.1_36523.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_382.1_36523.t1 atgcaaacaagaactatccctggtgctactgaaaatctgattgacattctaaaatggagtggaattcaccctgatgaagg tccagaatttggtggtagttatggaccgtatattcagtcacaaagaacagaactgtacagggagcagatagaaaaattgt tacagaatggctcagcttacagatgtttctgtactccaaagaggttagagttgctgaagaaagatgcttacagaagaggg gaggtgccaaagtatgataataaatgtcgacatcttacaagccaggaagtccaggaaaaattgaacaataatgagcctta tgttataagatttaagcttccttcatcagatgtacgatgggacgatatggttttaggtcctgttaccatcaatattgcct ccttggaaggagatccagtactgataaagtcagacaattttcccacgtatcactttgccaatgttgttgatgatcatttc atgaaaatatcacacgtactcagaggaatagaatggcaggtatcaacgcccaagcaccttttgctgtatgaggcttttgg atggacaccccctagttatggacatcttcctctaatcaaaaacaaggatggtacaaagctttctaaaagacaaggtgaca ttcacatagaacattttaagagtctttattattcacctcagtccattgtaaagtatgttacgctggtcggtggagggttt gaaggaaaatcggaggatgactgtgatacaatacaagatttagccagtaagtttcacatagatttgataaaaagtaaccc agcctgtttagacccagagaagttggagattatcagtaaacaatacctgtataaagatattgaggaaaaccaagatgata ctgtcaaaacgatacaggaaatcgtttcaaaatggcttctagataaccaccgcgtgggatcaaacgtatggtgttgtgat tccttacataaatttttgaaggaagagaggataaataaattaggtgacctaatatcagaggaattttcatttgtatggac actgccaaatgaaaaagacattgaaaatgctctgaaaaacattcctgaaacacataatgatttactacgtggaacaatac aaatacttcagtcagttgaagacagtgactttgaaaaaaacttttcttcaaaactcaaaaagctcgtcaagaatgaggga cttcaagtaaaatatgtgttctctttactcaggaaattattaacaggattggaggatggaccacctgtagctcagattgt ttctgttattggaaaggaatcagctgtgaaaagactagaaaattgcattaaaatcttaaactcaccatcctctttaaatt ga |
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Protein
| Protein ID | pfu_aug1.0_382.1_36523.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_382.1_36523.t1 MQTRTIPGATENLIDILKWSGIHPDEGPEFGGSYGPYIQSQRTELYREQIEKLLQNGSAYRCFCTPKRLELLKKDAYRRG EVPKYDNKCRHLTSQEVQEKLNNNEPYVIRFKLPSSDVRWDDMVLGPVTINIASLEGDPVLIKSDNFPTYHFANVVDDHF MKISHVLRGIEWQVSTPKHLLLYEAFGWTPPSYGHLPLIKNKDGTKLSKRQGDIHIEHFKSLYYSPQSIVKYVTLVGGGF EGKSEDDCDTIQDLASKFHIDLIKSNPACLDPEKLEIISKQYLYKDIEENQDDTVKTIQEIVSKWLLDNHRVGSNVWCCD SLHKFLKEERINKLGDLISEEFSFVWTLPNEKDIENALKNIPETHNDLLRGTIQILQSVEDSDFEKNFSSKLKKLVKNEG LQVKYVFSLLRKLLTGLEDGPPVAQIVSVIGKESAVKRLENCIKILNSPSSLN |
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