Gene
| Gene Model ID | pfu_aug1.0_382.1_36524 |
|---|---|
| Locus | scaffold382.1 : 22696 ... 38166 : + |
| To GenomeBrowser | scaffold382.1:22696..38166 |
| Genes list of scaffold | scaffold382.1 |
| Synonym | pfu_aug2.0_505.1_17502 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_382.1_36524.t1 | 1 | 1 | Claudin_2 | 17 | 245 | 1.5e-16 | 60.5 | 6.7e-20 | 2.5e-16 | 59.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_382.1_36524.t1 | gi|291229971|ref|XP_002734946.1| | PREDICTED: clarin-2-like [Saccoglossus kowalevskii] | 2.0e-17 |
Transcript
| Transcript ID | pfu_aug1.0_382.1_36524.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_382.1_36524.t1 atggataagaaaaaacgtatattcgtcatactaaccgtcttatgtagcttagcagcagttggtttgattgtggcttcttt tgcaactgataattggatcaaagggagtgctgaaaagcacaatacgaccattactaacaatacaagtactaacaatagag gatatgcacacatatactttggattgtttcgtggcaaaagaacaatagattacgggttttctccaagagatcaagtcatc acagtcaagtgctccagtccatattgcctactgtataatgaatcggtcctgtaccaggaggacccagataagaagtttga agatgtcgtcaatgattatgaggctgccaaaaataacatcaacatcacaggtgttgagatgtacaactatgggttatttc cctttgcctactggatctccaccatagttttaatgtcactaggtgttgttctaggacttgtgtatattggctttgccatc ttcaatatctttgggaaaccaatagaaaccatcactggacctctaggactctatctgtggaacatactggcattgctatt ttccttgggaggagtgatcgtgtacctagtcctctacatgtactactacaagaagagcatcctaccccacgaggacatat tacaggactttgtcagtactgccaatctggactcctccttctatctgtatgtgggaggagttgggtcactgctcatcaac ctccttctgctcctcatgtccggcctgaaaatgagatgtgggtgtacgcaagaagccgagaaaatcatggataacggcat tattctatattga |
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Protein
| Protein ID | pfu_aug1.0_382.1_36524.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_382.1_36524.t1 MDKKKRIFVILTVLCSLAAVGLIVASFATDNWIKGSAEKHNTTITNNTSTNNRGYAHIYFGLFRGKRTIDYGFSPRDQVI TVKCSSPYCLLYNESVLYQEDPDKKFEDVVNDYEAAKNNINITGVEMYNYGLFPFAYWISTIVLMSLGVVLGLVYIGFAI FNIFGKPIETITGPLGLYLWNILALLFSLGGVIVYLVLYMYYYKKSILPHEDILQDFVSTANLDSSFYLYVGGVGSLLIN LLLLLMSGLKMRCGCTQEAEKIMDNGIILY |
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