Gene
| Gene Model ID | pfu_aug1.0_3822.1_37717 |
|---|---|
| Locus | scaffold3822.1 : 65516 ... 82371 : + |
| To GenomeBrowser | scaffold3822.1:65516..82371 |
| Genes list of scaffold | scaffold3822.1 |
| Synonym | pfu_aug2.0_770.1_01119 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3822.1_37717.t1 | 2 | 1 | p450 | 8 | 75 | 3.6e-24 | 85.1 | 1.1e-09 | 1.6e-05 | 23.6 |
| pfu_aug1.0_3822.1_37717.t1 | 2 | 2 | p450 | 99 | 222 | 3.6e-24 | 85.1 | 1.2e-20 | 1.8e-16 | 59.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3822.1_37717.t1 | gi|242332605|ref|NP_034133.2| | cytochrome P450 2C39 precursor [Mus musculus] | 3.0e-21 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| mantle | 1 |
| pearlSac | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3822.1_37717.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3822.1_37717.t1 atgttcggtagcattcattctcatggacaaattgacacaacagacacgttagttgagtaccgccgtctccgtaatttgta cggcgatgtcttctgttttgtgattggctcccagccgacgatcgtaataagtggtatcaatgccattaaagacctattag ttctgaagggagacgctctctcagatagaccagaaattttcatcatgcgaaaactgaacaaaggactcggatcccatctt ctcaagacatgtgtacgtaacaccttactcccccttgtcggatgtcatacacaaaactatgtctccggaattttggcgag caatggcgatctatggaaggaacacagaacatttgcaattcagacattaaagcaactcggcaatggcgtcccaaatttgg aatcgattattcaatttgaaatcaggcaatttttcgaaaatatcaaaacatttagagaatcgccaattgatcctgcaaaa tatctgaatattggaatgcttaatgtcgtgacaagtctgatgtttggaaaacgcttcggagagaacgacaagaagttcaa tcgtcttttagaactaatggacgccatgatcaacgatccatctctgagaaacatagcaggctacttttttcatgccgagt ttcttccaggggatccgtttaagaatgcgtgtaaagtggtgcgttggattcaatatgcatctcacgtgagtggcattctc catattgttctcatcagcgtccattgtatgcggcaagtttgctatcctagtgcttatgtcccgtatatgattcttgcggc cgtaactgttgcagataaaagttttagaagaaatttgagcattgagggagaagccactgtcaaacttttcttccgatttc acctcataaacaacgtagcaaatccaatcgtttacggcctactggataagtcggtgtctgtctcgatgcacatattgatg gacatgtctgataaaaatgccccctttgacgatatcgacagccgttcaatcgcaatacagaatgttatcgatcactctgg gcagagagatctcacatgcctttacaagatccccgcagtgaccgaaggacctcctgatttcagccgttatgcaacgtaa |
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Protein
| Protein ID | pfu_aug1.0_3822.1_37717.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3822.1_37717.t1 MFGSIHSHGQIDTTDTLVEYRRLRNLYGDVFCFVIGSQPTIVISGINAIKDLLVLKGDALSDRPEIFIMRKLNKGLGSHL LKTCVRNTLLPLVGCHTQNYVSGILASNGDLWKEHRTFAIQTLKQLGNGVPNLESIIQFEIRQFFENIKTFRESPIDPAK YLNIGMLNVVTSLMFGKRFGENDKKFNRLLELMDAMINDPSLRNIAGYFFHAEFLPGDPFKNACKVVRWIQYASHVSGIL HIVLISVHCMRQVCYPSAYVPYMILAAVTVADKSFRRNLSIEGEATVKLFFRFHLINNVANPIVYGLLDKSVSVSMHILM DMSDKNAPFDDIDSRSIAIQNVIDHSGQRDLTCLYKIPAVTEGPPDFSRYAT |
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