Gene
| Gene Model ID | pfu_aug1.0_3823.1_08733 |
|---|---|
| Locus | scaffold3823.1 : 1 ... 14575 : + |
| To GenomeBrowser | scaffold3823.1:1..14575 |
| Genes list of scaffold | scaffold3823.1 |
| Synonym | pfu_aug2.0_174.1_13727 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3823.1_08733.t1 | 3 | 1 | REJ | 104 | 233 | 3.7e-24 | 84.8 | 6.9e-07 | 0.0026 | 16.1 |
| pfu_aug1.0_3823.1_08733.t1 | 2 | 1 | Ion_trans | 471 | 498 | 2.2e-06 | 27.0 | 0.31 | 1200.0 | -1.5 |
| pfu_aug1.0_3823.1_08733.t1 | 3 | 2 | REJ | 591 | 710 | 3.7e-24 | 84.8 | 4.9e-21 | 1.8e-17 | 62.7 |
| pfu_aug1.0_3823.1_08733.t1 | 3 | 3 | REJ | 730 | 775 | 3.7e-24 | 84.8 | 0.01 | 38.0 | 2.4 |
| pfu_aug1.0_3823.1_08733.t1 | 2 | 1 | PKD_channel | 847 | 896 | 0.0 | 275.6 | 0.25 | 910.0 | -2.1 |
| pfu_aug1.0_3823.1_08733.t1 | 2 | 2 | PKD_channel | 941 | 1370 | 0.0 | 275.6 | 0.0 | 0.0 | 275.6 |
| pfu_aug1.0_3823.1_08733.t1 | 2 | 2 | Ion_trans | 1162 | 1360 | 2.2e-06 | 27.0 | 1.6e-09 | 6.1e-06 | 25.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3823.1_08733.t1 | gi|198434309|ref|XP_002126918.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3823.1_08733.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3823.1_08733.t1 gttaacagatgatgtgaaaattgatggaaactggtccccatggagcaaattttcttcgtgtagcgtaacaatgagtcacg gtaccaaacgtagatggcgaacctgtaccgacccggaaacatgtactggcgaaccttgtgagggtgtcggagatgactac agccattgtgaaatcataccaaaacaattcagcggaccagcgtttggagagaattatatgactgaaaatgatgcgctagc attttactctgttgctaatatacatatcttcccaacggcacaattagattcgcggtattatgggcatcgcgaatggactc tgttcaggataacagaaacaggaaatgaaactcttctcgattacaagaacgacaactctctcagttatgccatcggacct ggtgatttatctgatggattgcataaactgtacttaacattttacacatttaacaattctgcagaatacgttcatggatg gatgtatttagagagtatttatcccccacctcgtgtatttatacaaggaggatcagggaaagttagtggcccgggcgaaa tcaaattcgatgcaagatctggctcctatgacctacttttaggtcctggtcatccagagtcgttgaattttacatggtct tgccacgagtttcctacgacaaagttagatgaactgatcgggatcaatataaatccaaagtacatttacttaaatgacgg tgaacaagtaaacattacatggagcacgtttgacacagtgctgaacatgtcggattgggtgtcgtctgcgtcattgttta ctaacattggactcataagtcaaactgccttggatcatgacttcaatctttttaacacagtgatggataaaagggcagat atgacttgtcagagtattttggcgtctcctaatgactgcccagaaagtttcaacggttcggacacatgccttatttattt caacacttctttctcctgtgctattccaacaggatatttttgctacaataatatcagatcgcctatccgctgtgaaggaa gtgtgtacaatggcggtaaccaatcatgtatcgattatttaaaggactcatgtgacgcaaaggcggaatataactccaaa gtctggaatggaacggaatatgatcacgtgatggaaacctacgtttttgagaacctattggcccatatcaagcagatgtc tatcgatctaaggcagcgatctcaatatctgataggtggatccatggcctttggattcaaactgggtgcagccatggtca cagaaacgaacgatttatctacaagacttaaaagtcacagtgataaattagtcggtttacgcagattgatgttagatttg gaaaacctcagtggaggaataagatttcgtaactctggtatgaccagtttctcagattatctgacgacatggcacaatct aacagacagatcggccactcttccaagtactttgtacgaattctaccaaaacacaacactttacaacgccgccactctga aaactttggaggaagacaccgagcgtctcactgccctgtacgagggtctttttgcaaacgactcgtgcccgggtttctcg ggaaattcgaaaggttacgccgaaattcacacaaacggtagcgcgggtggcgacattcgcggttttatcgtgactgtaaa agctaatgttgggcaatccagaagttacatgacttttcaacaaagtttacaaatacagtctccgttgaacacgactccga cagactccagacatcaagtaaatggaggaatcccaaaattggagattcaatgtagattgaattgtaaacaaaaggtggca agcacatctgtactctctctaagggcagtttgcgctacttgttccttttatgaaatgcgcaatgcaactttcttttggaa tttccagaagattgatatgtattatagagatacacagaatttctcaaaatggaagaatggacttgaaacagatattaaca gcgaaaagtttgtgttgtctgcgcacactctagatcccggaaaacattatttgatttcggtgtacatgtatctggagaac ggaagtagcgctctgtcgatgatgatcattgaaacaacccagccaccctacagttacactggtgtcaagtgtgaaatatc aaaggagggaagtgaaaaatggctgagaaacataacgcttaacgagggatacattgaagacaactacctggtggaggtct atatacagatattcgacacttttgacgactatgccgactgcgtgcttaagtctattcagatttatcctttggaaatggaa tcactgacttcgtcaatggataaaatagaaagtgctttgctgtctgggaacgccaaagtcgtctcaatgattaccgaaac agctgccaattctatagtgaacgaggagtttcctccggcacttgtggacgatccagcccaatggacaagtattggaacat tcccctcaggatctaatgatagtagtgtgacatttgaagatctgcttaatagtctggattctagtaagaatgaatcagca aagaaactttactcagagacacttgagaaatactcttcctccatgacgtcatcaatccaaaccctagaaatgtacgacgt tgttagtttgagacaaaatacgcatgcgctggggactctaatgagtaacaaagacttattggtggatgaaatactggtca tcgtactttcgacaattttggcattgtgccttaagagcaaacaaaaagggaaagaagtaaactacaaaaaagatgaactt ttatcagaggcaaaagaacgagctgtagcctcggtggaacaatattacgagtggctatacaacaccttgttaccttttgc ctttgccgagtactggtacaacagtgacaaaatgaatacagatgaacgaggctttatggacgatctggtaaattacaggg ttggtccaatacgactaaggcagctaagagcaaaagaagtggaatgcttggtaccaattatgtcaaatctgcagtgttat gacgactacagtgtctttagggaggacacaactgattactgcgagggttgggagacccaaaactgctcagcatatgtaac ttatgaacatttatctctggagtcatggagattcacctcctctaaggacatatggggaatgcctgtcaccggggaaatat ccacatacggagggggagggtacatagctgaactcggtgttaacctggaattatcaaggatgatactggatgatcttcag aagtatgaatggatagatagaaaaacaagagcagtagtgactgagtttaccatctacaatgccaacgttaatctattcac ttatttctctttacttactgagttaccagaattcggaggcattcttacatatagttttgttcgtatattccgtccgtatc aacatttgggtgacatgggcgtctttgttttcgtatgcgaatttattttcctcatagcagtgttagttgtttccacaagg atgggagttgagatctatcgccgcaagaccaacttcttcaaagaatcatgggaaatatttgacctggtcattctcatcct aactctgtttactatcgcagtttacattgtaagacttgtgtttgcagaaatgacaatgaacgaattcttgaagaacaaat ataaaccggttaattttgcccatgtggcagtttgggatgaagttttcatggcttttgtaggaacattggtaggacttgtc acggtccgtttaatgagagttttaagctacagtaaacgtctgactgaaattgcatccgttttgtcacacggctcaaaaga acttgtaggggttttcattatgtttttcatagttttctttgcatacatctgtattggctatctcgtatatggacgtacac ttggaaactataggaacctttttgtatcttctactaccattatcaatgctataattggcaaaaacaatatagagggcctt cttggagcttcgccagtgattgctcaaatatattattttacattcgttttattcgtcatgtggattttgatgacgatgat gaatgcgacattgaacaatagcattacggccgtacgtgacgtcaggatgcacgatgaagaaggaaaaaataattacggta tatatgacttggtgaaacagacatgtttagacatgacgtcagatatactctctatctttggatcacagaagaaagagcga ccaatgacagcacgagatatcgagatcgaggttgaagatttgaccaatgaaagagcgccatcaacaaatgacgacggtga cgtggaaaagggcaactaa |
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Protein
| Protein ID | pfu_aug1.0_3823.1_08733.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3823.1_08733.t1 LTDDVKIDGNWSPWSKFSSCSVTMSHGTKRRWRTCTDPETCTGEPCEGVGDDYSHCEIIPKQFSGPAFGENYMTENDALA FYSVANIHIFPTAQLDSRYYGHREWTLFRITETGNETLLDYKNDNSLSYAIGPGDLSDGLHKLYLTFYTFNNSAEYVHGW MYLESIYPPPRVFIQGGSGKVSGPGEIKFDARSGSYDLLLGPGHPESLNFTWSCHEFPTTKLDELIGININPKYIYLNDG EQVNITWSTFDTVLNMSDWVSSASLFTNIGLISQTALDHDFNLFNTVMDKRADMTCQSILASPNDCPESFNGSDTCLIYF NTSFSCAIPTGYFCYNNIRSPIRCEGSVYNGGNQSCIDYLKDSCDAKAEYNSKVWNGTEYDHVMETYVFENLLAHIKQMS IDLRQRSQYLIGGSMAFGFKLGAAMVTETNDLSTRLKSHSDKLVGLRRLMLDLENLSGGIRFRNSGMTSFSDYLTTWHNL TDRSATLPSTLYEFYQNTTLYNAATLKTLEEDTERLTALYEGLFANDSCPGFSGNSKGYAEIHTNGSAGGDIRGFIVTVK ANVGQSRSYMTFQQSLQIQSPLNTTPTDSRHQVNGGIPKLEIQCRLNCKQKVASTSVLSLRAVCATCSFYEMRNATFFWN FQKIDMYYRDTQNFSKWKNGLETDINSEKFVLSAHTLDPGKHYLISVYMYLENGSSALSMMIIETTQPPYSYTGVKCEIS KEGSEKWLRNITLNEGYIEDNYLVEVYIQIFDTFDDYADCVLKSIQIYPLEMESLTSSMDKIESALLSGNAKVVSMITET AANSIVNEEFPPALVDDPAQWTSIGTFPSGSNDSSVTFEDLLNSLDSSKNESAKKLYSETLEKYSSSMTSSIQTLEMYDV VSLRQNTHALGTLMSNKDLLVDEILVIVLSTILALCLKSKQKGKEVNYKKDELLSEAKERAVASVEQYYEWLYNTLLPFA FAEYWYNSDKMNTDERGFMDDLVNYRVGPIRLRQLRAKEVECLVPIMSNLQCYDDYSVFREDTTDYCEGWETQNCSAYVT YEHLSLESWRFTSSKDIWGMPVTGEISTYGGGGYIAELGVNLELSRMILDDLQKYEWIDRKTRAVVTEFTIYNANVNLFT YFSLLTELPEFGGILTYSFVRIFRPYQHLGDMGVFVFVCEFIFLIAVLVVSTRMGVEIYRRKTNFFKESWEIFDLVILIL TLFTIAVYIVRLVFAEMTMNEFLKNKYKPVNFAHVAVWDEVFMAFVGTLVGLVTVRLMRVLSYSKRLTEIASVLSHGSKE LVGVFIMFFIVFFAYICIGYLVYGRTLGNYRNLFVSSTTIINAIIGKNNIEGLLGASPVIAQIYYFTFVLFVMWILMTMM NATLNNSITAVRDVRMHDEEGKNNYGIYDLVKQTCLDMTSDILSIFGSQKKERPMTARDIEIEVEDLTNERAPSTNDDGD VEKGN |
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