Gene
| Gene Model ID | pfu_aug1.0_3823.1_08737 |
|---|---|
| Locus | scaffold3823.1 : 46736 ... 50674 : + |
| To GenomeBrowser | scaffold3823.1:46736..50674 |
| Genes list of scaffold | scaffold3823.1 |
| Synonym | pfu_aug2.0_174.1_13731 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3823.1_08737.t1 | 2 | 1 | MFS_1 | 4 | 238 | 7.8e-12 | 44.5 | 1.1e-15 | 7.8e-12 | 44.5 |
| pfu_aug1.0_3823.1_08737.t1 | 2 | 2 | MFS_1 | 259 | 286 | 7.8e-12 | 44.5 | 0.053 | 390.0 | -0.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3823.1_08737.t1 | gi|301604792|ref|XP_002932011.1| | PREDICTED: major facilitator superfamily domain-containing protein 1-like isoform X1 [Xenopus (Silurana) tropicalis] | 3.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3823.1_08737.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3823.1_08737.t1 atggacagagtggtctccttctggtttgccgaccgtatagaatttgcatggggagtcacaatttccatggcccgacttgg tacagtaatgaatttcatagggactgcatatattgccgagaaattaacgttagacattgcatgctgggtaggtgctttgc ttggggctttgaccttcctattggccattgtgcttgtctgtttagacgtatatggagcaagaagatcaaacgtctatcaa cgtcatgatactgaggccaaaaagctgagctttgggaggattaaagaattcaatctacagttttggtttttaatcataat tctagcagcattttatgcaaattttaatccatttgtatccaatggaagccaatggatgagtgacaaatacggaatccata aaacaacagcatcatacatagtcggaatttcctctgatgtagccgtaattttttctcccatattcggagctttattgact agatttggcggcagatcttttgcggttttcctaggatgtgtattaattatacctgtgtatgtgcttgtactatttacacg tgtttctccaatcatcataaatattgtaatgggatttaattatgtctttattgtggtaagcctatggcctgctatttcca aaagtgttcccgtggatctagtcggcacagctcttggtatcacaagtctattctctggaatattagcgggtctaagcacg ctaggagtgggtaaactactgaactatctaaacgaggacaaagcaccatactctatgagcagttgggccatggtcatggg tatttttctgggaatatctggaatatcattgttggcttccttgccagctctcataatggatctcaatagggtttgtattt ga |
|
Protein
| Protein ID | pfu_aug1.0_3823.1_08737.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3823.1_08737.t1 MDRVVSFWFADRIEFAWGVTISMARLGTVMNFIGTAYIAEKLTLDIACWVGALLGALTFLLAIVLVCLDVYGARRSNVYQ RHDTEAKKLSFGRIKEFNLQFWFLIIILAAFYANFNPFVSNGSQWMSDKYGIHKTTASYIVGISSDVAVIFSPIFGALLT RFGGRSFAVFLGCVLIIPVYVLVLFTRVSPIIINIVMGFNYVFIVVSLWPAISKSVPVDLVGTALGITSLFSGILAGLST LGVGKLLNYLNEDKAPYSMSSWAMVMGIFLGISGISLLASLPALIMDLNRVCI |
|