Gene
| Gene Model ID | pfu_aug1.0_38346.1_34066 |
|---|---|
| Locus | scaffold38346.1 : 1 ... 4489 : + |
| To GenomeBrowser | scaffold38346.1:1..4489 |
| Genes list of scaffold | scaffold38346.1 |
| Synonym | pfu_aug2.0_258.1_27132 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_38346.1_34066.t1 | 2 | 1 | NRDE-2 | 41 | 67 | 3.4e-32 | 111.6 | 0.19 | 2800.0 | -3.2 |
| pfu_aug1.0_38346.1_34066.t1 | 2 | 2 | NRDE-2 | 246 | 389 | 3.4e-32 | 111.6 | 2.3e-36 | 3.4e-32 | 111.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_38346.1_34066.t1 | gi|334310515|ref|XP_003339507.1| | 1.99993e-41 |
Transcript
| Transcript ID | pfu_aug1.0_38346.1_34066.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38346.1_34066.t1 cagtgccggtattgagaaatctgtgccattgtatcaagctgttgattcacatgaaagcaatcaagaagaaaaagctgtga aaaagcatgataacagctcatctgaagatgactatcataaagaaaagaagaagaggaagaaagagaagcataagcacaaa aagaagaagcacaagtcagagaaagaaaggaatgttagtccatacagagagagtgacttagatattaaaaggaagaagac aatttatggtaataaagtatttatagatgaaatccgtgatttggaggcaaaggatgcttttcgtattgacagaagatcga atgcagagaattggaattaccagtctttgtacaaaggtcatatagcaaaatttcacaacacatatcgtacttgcatgggt cagactgatggtgaacctttgtatgtaaaagagaagattgaaaaggacatcaaaaaggagaagaagcggtactatagcaa agaaaatgccagagtagcaaatagagcaccgattgagagattatgcacagacgacgcaagttccaaaaatagccaaactg ttcttcctgaaaaaatgctactccctagtgagccaatcatgaaggacagaattagagatgtggatgtgagagaaaaactg cttgacgctgatactaaattatatgttgaaggcaagggaagcattaaagatgatattgatgaaggtgaaatttctgctga cgttttggcatcgcatcgtaagattgaagaatataacataaaactaagagaggatccacataatgttcctctgtggttag aatttgtgaagtatcaggacaagagaagtgatcctgcagatagtgtgacaaaaggcaaagaagaggtcaaaatatcaaaa ttggccctgcatgaaaagaaggtggcagttatgaagaaagctatggaaagtaatcaaggaaatctggaactaaagatgaa ataccttgaactttgtcaagagacttgggaaccccatcaaatcagtaaggaaatagaagacatgttgtttgtacagccaa ctaatctgtcactatggcaacattatttattatttcatcagagtcgtctatcatcattcagcgtcacaaggatgagtaag atgtatcagaaatgcctgaagacattgttgaagtacagtaccggtaaaatacatactgctgtttccacaggagatgttcc acaaaaaatgttaggtaaggatgggatgctatcactagtcatatactga |
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Protein
| Protein ID | pfu_aug1.0_38346.1_34066.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38346.1_34066.t1 SAGIEKSVPLYQAVDSHESNQEEKAVKKHDNSSSEDDYHKEKKKRKKEKHKHKKKKHKSEKERNVSPYRESDLDIKRKKT IYGNKVFIDEIRDLEAKDAFRIDRRSNAENWNYQSLYKGHIAKFHNTYRTCMGQTDGEPLYVKEKIEKDIKKEKKRYYSK ENARVANRAPIERLCTDDASSKNSQTVLPEKMLLPSEPIMKDRIRDVDVREKLLDADTKLYVEGKGSIKDDIDEGEISAD VLASHRKIEEYNIKLREDPHNVPLWLEFVKYQDKRSDPADSVTKGKEEVKISKLALHEKKVAVMKKAMESNQGNLELKMK YLELCQETWEPHQISKEIEDMLFVQPTNLSLWQHYLLFHQSRLSSFSVTRMSKMYQKCLKTLLKYSTGKIHTAVSTGDVP QKMLGKDGMLSLVIY |
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