Gene
| Gene Model ID | pfu_aug1.0_38408.1_41073 |
|---|---|
| Locus | scaffold38408.1 : 1 ... 6075 : - |
| To GenomeBrowser | scaffold38408.1:1..6075 |
| Genes list of scaffold | scaffold38408.1 |
| Synonym | pfu_aug2.0_348.1_27268 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_38408.1_41073.t1 | 2 | 1 | zf-rbx1 | 18 | 78 | 7.6e-07 | 29.1 | 6.2e-10 | 7.6e-07 | 29.1 |
| pfu_aug1.0_38408.1_41073.t1 | 1 | 1 | zf-RING_2 | 24 | 78 | 7.7e-09 | 35.2 | 6.3e-12 | 7.7e-09 | 35.2 |
| pfu_aug1.0_38408.1_41073.t1 | 1 | 1 | zf-C3HC4 | 24 | 77 | 1.5e-07 | 30.9 | 1.2e-10 | 1.5e-07 | 30.9 |
| pfu_aug1.0_38408.1_41073.t1 | 1 | 1 | zf-RING_5 | 24 | 78 | 6.7e-06 | 25.7 | 5.4e-09 | 6.7e-06 | 25.7 |
| pfu_aug1.0_38408.1_41073.t1 | 2 | 2 | zf-rbx1 | 68 | 87 | 7.6e-07 | 29.1 | 0.13 | 170.0 | 2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_38408.1_41073.t1 | gi|307186056|gb|EFN71788.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_38408.1_41073.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38408.1_41073.t1 gaatgtatggaggaacatgagcgtgacatggaattgtcgtttgcaatagcgcggagtaaagacaaggcgtgtggtatatg tatggacacgataatggaaaagaacccgcccaccgagaggagatttggaatcctgtctcactgtagtcacatcttctgtt tgtcttgtataaggaaatggagaggtgcaaaacagtttgaaaacaaaattgttaaggcatgcccagaatgtcgtgtgaac tcaaactttgttactccaagcaagtactgggtggaatcggaggaagacaaacaaaaactcatcaatagttataaaacagc attaagtaacaagcactgcaagtatttcaaacgtggtaatggagagtgcccttttaataacaactgcttctatctacatg ccaaccctgatggctctaaagcttacgccaagcctacggttcggcgtcgcagacaaaacgctgatggtgatttggacttt atgggacactttaacttgtgggatttccttgaagaaagagaaagcgaacgtagtctcttactaatggagttagaagccaa tcttgagagtctcttatttgatctaatgctaggttacgacagtgatagtgacttggatgatttttga |
|
Protein
| Protein ID | pfu_aug1.0_38408.1_41073.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38408.1_41073.t1 ECMEEHERDMELSFAIARSKDKACGICMDTIMEKNPPTERRFGILSHCSHIFCLSCIRKWRGAKQFENKIVKACPECRVN SNFVTPSKYWVESEEDKQKLINSYKTALSNKHCKYFKRGNGECPFNNNCFYLHANPDGSKAYAKPTVRRRRQNADGDLDF MGHFNLWDFLEERESERSLLLMELEANLESLLFDLMLGYDSDSDLDDF |
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