Gene
| Gene Model ID | pfu_aug1.0_3846.1_23422 |
|---|---|
| Locus | scaffold3846.1 : 30594 ... 53995 : - |
| To GenomeBrowser | scaffold3846.1:30594..53995 |
| Genes list of scaffold | scaffold3846.1 |
| Synonym | pfu_aug2.0_611.1_04400 |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | pecanex-like protein 1 |
| Description | NCBI BLASTP hit to XP_001368516.1PREDICTED:XP_001368516.1 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3846.1_23422.t1 | 2 | 1 | Pecanex_C | 363 | 450 | 6.19374e-43 | 146.4 | 1.7e-40 | 1.3e-36 | 125.8 |
| pfu_aug1.0_3846.1_23422.t1 | 2 | 2 | Pecanex_C | 566 | 593 | 6.19374e-43 | 146.4 | 8.5e-08 | 0.00063 | 18.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3846.1_23422.t1 | gi|126282418|ref|XP_001368516.1| | PREDICTED: pecanex-like protein 1 isoform X1 [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_3846.1_23422.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3846.1_23422.t1 atgagggagagatacctgtctgaatcgtcaagcagtgcttctaatgaaggagacagtacttttgacacaaaccctgataa ctctccagaggttgttaaagaggaaaaggaagaaggggaggtatcaaaaccagtggatgaaaatcttgagaagatgaaga aacaaggggccataccaaaacattacattagaaatccacaaccaaaggaaccatctcctatacaggaggacaccgaggct ggtactccctcttcaggtgaaatgatagacgaagacttcaagaaaaaaatcctagaaattctggatgaatcctctggaaa ctcggaacaaatgaagagattagttagagctgtcatcgaaaaagtaggggcgttaggagcccttgttttatcctccaact tttaccacgacatcttcgtcttcttattctgttttatcattgctagttgtcagtattcactcatcaagagtgttcaacct gatgcggcctcaccaatgcatggttataatcgtatggtagtattcagccgtccattttatttctgtttatgttgtggcct tatgttactactagactactgccagagtcgagtaccatcgtcgtcattagtttacggaacatcaacaactgttgttgctt ctcttcagtttggtagagatctccttaaagcctctgtgagtctgacatcagctgtttactgttttgtcagaagtctgata gctgtggcaatactttatggattctgttatgtagctgttgaggttggggacagtactaaagcatgtgaagacaagaatct agcacagaatgccgtgttttctatattttctggtattttagtagccatatcataccaccttagccgatcggccagtgatc cgactactttatggatgttaattaaagactgtacttgtccatccataacagagagtacaggagagggggagctggtagat ccattacctggtaaactcaagaaatgtgtgattgagaggttacagtctgatctacttgtgggtatcgctgttgggattat tgtgttctctgttcatatcagtactgtcttcagcagtccagtcttacagggagacttccgaatcacttcacctcacgatg agtgggtgtttgctgatatggaactgcttagaagagttgtggcccctggtattagaatggcactcaaattacatcaagat tattacttgtttatggaagagtatgaagatcatgagacgttatatgacgccatcagtaactatgaacagaacatggtgat atcccatgaggccgatccacaatggaggaatgctgtactgtcaaatactccatcattgttagctttaagtgttaatcaat ttattttaggcacatattgtcaacaaagagaagtagaagctataactgaaggagtggaagataatgatgcgtttaaccag cgttggctggcatgggaagtggtagtcaccaagtatgtgttagaggggtacagtatcagtgataatagtgcagccactat ggtacatggatttgatactcgcaaagttctactcaattactatgttatgagtatcatctactacaccgtgcgttcccccc acctggaggcgtggcttcagctcgactctgtggtggagcatttaaactccacactggatgaggattttgtggatgtggat ccggtatttaacatacatgtgtttgatgtggagggatcagatgagtacaagatcatcatgctgaacaagaaattcctcac ttttagggtcgtcaagatcatggatccttcacttgtctttgacaacattaacctgggacggaggatagatgtacagtggc caaacgaggaatggcgtcagagtggcggaaaaagtggttggcaaggatggataccaaccaaaggcaatcgtaataaaaat cataaaggtttacatatccttgcaaagaatgtgaatatgataataatgaaagataaaactagtcttaatattgtgagaag tatttga |
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Protein
| Protein ID | pfu_aug1.0_3846.1_23422.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3846.1_23422.t1 MRERYLSESSSSASNEGDSTFDTNPDNSPEVVKEEKEEGEVSKPVDENLEKMKKQGAIPKHYIRNPQPKEPSPIQEDTEA GTPSSGEMIDEDFKKKILEILDESSGNSEQMKRLVRAVIEKVGALGALVLSSNFYHDIFVFLFCFIIASCQYSLIKSVQP DAASPMHGYNRMVVFSRPFYFCLCCGLMLLLDYCQSRVPSSSLVYGTSTTVVASLQFGRDLLKASVSLTSAVYCFVRSLI AVAILYGFCYVAVEVGDSTKACEDKNLAQNAVFSIFSGILVAISYHLSRSASDPTTLWMLIKDCTCPSITESTGEGELVD PLPGKLKKCVIERLQSDLLVGIAVGIIVFSVHISTVFSSPVLQGDFRITSPHDEWVFADMELLRRVVAPGIRMALKLHQD YYLFMEEYEDHETLYDAISNYEQNMVISHEADPQWRNAVLSNTPSLLALSVNQFILGTYCQQREVEAITEGVEDNDAFNQ RWLAWEVVVTKYVLEGYSISDNSAATMVHGFDTRKVLLNYYVMSIIYYTVRSPHLEAWLQLDSVVEHLNSTLDEDFVDVD PVFNIHVFDVEGSDEYKIIMLNKKFLTFRVVKIMDPSLVFDNINLGRRIDVQWPNEEWRQSGGKSGWQGWIPTKGNRNKN HKGLHILAKNVNMIIMKDKTSLNIVRSI |
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