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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_38469.1_26829
Locus scaffold38469.1 : 2636 ... 4675 : +
To GenomeBrowser scaffold38469.1:2636..4675
Genes list of scaffold scaffold38469.1
Synonym pfu_aug2.0_2787.1_25532

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_38469.1_26829.t1 1 1 7TM_GPCR_Srw 20 157 2.3e-11 43.4 9.9e-15 2.9e-11 43.0

Transcript
Transcript IDpfu_aug1.0_38469.1_26829.t1
Definition-
>pfu_aug1.0_38469.1_26829.t1
atggaatcctgtcatgcttttgtcaccgagcgtttctccccttatacctacatcgctgtctacagctgggcacgggcagc
aatcgtccatattctaccttgtattggcatgatagtcttcagcggacgcatgctgtatatcataaaaaaagccagcaaga
acagacagacatttcaacgtcaaggacagacatccggacaaaacgatgctcgagaaaaccgcttgacgacctggcttgtc
atttttgtagttgctagcgtgattgtagtggaaatgccaagcgccatttatttcattattttcgctgcagacacggtcat
tcctgatatggagttgaaatcgaccaatatcaatgagccaattacagtgtcgctcaatgttcttgtaagcttatcttacc
cgcttttgttcatcatgtactgttgcatgagcaaaaattttcggaaatcactgaaaggtgtatgttgtcgcgcttgtcat
tactctgatagagatgactcgggatttgatggtcagaacagcacgagcagaggagggtcgtcaagggtaaccactatatc
agacggaggaaaaggtaaaccgaccgcgaaatctatggggtatggaggaggaagtcccctttctgatgacggcatgtatc
ttaacaacatgagcgggaagtccagagaaatagatccttcacaaaatggaggcaaaagacgctcgacaaagatatccatc
ttatcacaagaaaagagtagagttcatgatacgaagacgtcaccagggaaggaaagcataacatcgaacgacatcgaaaa
taaatctgtaacgagaaagaagaacgaggaaggcgatttcaattcagagcataaaatctgcgacgaaacagatttccata
ttccgtgtggaaccgtaggagaggaagctgtcctcaatccacttaatggaacagcggcacgtttagaggaagggattcct
cagcatgagaactacccaaaacgcttagaggactaa

Protein
Protein IDpfu_aug1.0_38469.1_26829.t1
Definition-
>pfu_aug1.0_38469.1_26829.t1
MESCHAFVTERFSPYTYIAVYSWARAAIVHILPCIGMIVFSGRMLYIIKKASKNRQTFQRQGQTSGQNDARENRLTTWLV
IFVVASVIVVEMPSAIYFIIFAADTVIPDMELKSTNINEPITVSLNVLVSLSYPLLFIMYCCMSKNFRKSLKGVCCRACH
YSDRDDSGFDGQNSTSRGGSSRVTTISDGGKGKPTAKSMGYGGGSPLSDDGMYLNNMSGKSREIDPSQNGGKRRSTKISI
LSQEKSRVHDTKTSPGKESITSNDIENKSVTRKKNEEGDFNSEHKICDETDFHIPCGTVGEEAVLNPLNGTAARLEEGIP
QHENYPKRLED

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