Gene
| Gene Model ID | pfu_aug1.0_38488.1_55657 |
|---|---|
| Locus | scaffold38488.1 : 1 ... 16037 : + |
| To GenomeBrowser | scaffold38488.1:1..16037 |
| Genes list of scaffold | scaffold38488.1 |
| Synonym | pfu_aug2.0_8.1_26626 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_38488.1_55657.t1 | 2 | 1 | THOC7 | 2 | 134 | 3.3e-33 | 114.8 | 2.7e-36 | 3.3e-33 | 114.8 |
| pfu_aug1.0_38488.1_55657.t1 | 2 | 2 | THOC7 | 145 | 167 | 3.3e-33 | 114.8 | 0.95 | 1200.0 | -0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_38488.1_55657.t1 | gi|148223784|ref|NP_001080651.1| | THO complex subunit 7 homolog [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_38488.1_55657.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38488.1_55657.t1 atgacataataaagaaacgcttactgatagagggggatggagggaatgatgataaacgactgaatagtttgctgaagtct tttgtacgttggtgtaattctgacgaaggagatgaggacagcaacttggcccatcagagaatgcttgcacaattagcaca aagtgaatacaccatcgaaaagtcactttatgtacatcggatgaacttgagggagcaagaaaattatgagaaactctgta aacaaattgaatcaaaaataaaggaagctacagagaaaatagctgaatgtaagagtgaacttcagcaggcaaaaaggatc cgtaaaaacagacaagagtacgatgcccttgcaaaagtcattcagcagcatccagatcgacaaagtacaacaaagcagct tgagacactggacaaggatgttactttacttgaagagcagaaagaaacattggaacagaagttggacctgagaaggaagc agttccatgtcctcatagcagcaattcatgaaatggaaaagattttagaggaggatgaagtcaaggatgaagaaaatgaa agcaccatggacacaagctga |
|
Protein
| Protein ID | pfu_aug1.0_38488.1_55657.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38488.1_55657.t1 DIIKKRLLIEGDGGNDDKRLNSLLKSFVRWCNSDEGDEDSNLAHQRMLAQLAQSEYTIEKSLYVHRMNLREQENYEKLCK QIESKIKEATEKIAECKSELQQAKRIRKNRQEYDALAKVIQQHPDRQSTTKQLETLDKDVTLLEEQKETLEQKLDLRRKQ FHVLIAAIHEMEKILEEDEVKDEENESTMDTS |
|