Gene
| Gene Model ID | pfu_aug1.0_3851.1_30548 |
|---|---|
| Locus | scaffold3851.1 : 18686 ... 27389 : + |
| To GenomeBrowser | scaffold3851.1:18686..27389 |
| Genes list of scaffold | scaffold3851.1 |
| Synonym | pfu_aug2.0_80.1_00194 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3851.1_30548.t1 | 2 | 1 | DDE_Tnp_4 | 110 | 134 | 5.1e-09 | 35.9 | 0.078 | 580.0 | -0.1 |
| pfu_aug1.0_3851.1_30548.t1 | 2 | 2 | DDE_Tnp_4 | 174 | 261 | 5.1e-09 | 35.9 | 4.3e-12 | 3.2e-08 | 33.3 |
Transcript
| Transcript ID | pfu_aug1.0_3851.1_30548.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3851.1_30548.t1 atgccgtacaggaagcaaaaactcaatgtcctctacaaagcgtcaagtgatatatctgtgataaagggcgatgcattgat tgagcttttacaatatcttaggacaaccgctcttcgacacgagaaaaccaggattaactttgatgatgaaagatctttat cagatgaggaatatttgtcattacttggagttgggaaagctgcattcaaggatatgctaacatatttagatggcctggta cgcaacacacccgccagaagtacgaaaacaagtcttgccattttcttattaaagatgagatctggtatgtccaacaagat gctgtctacggtctttaatgtatctaagtctagtatacgaagatgtatctcaaatgtgagcaatgttctcaaggaaaagt tcgtatctgagagcttgggattccaaagcatttcaaggtcagacgtcatcaacaaccataccagaaaattggcacagacc ctcttttgtgacgacggcaaatcacaggcagttttggtcctagatggcacttatatctacatacaaaaaagtgggcattt tagattccagaggcaatcgttcagcatccacaaggggaggccactcgtaaaacccatgattatagtatcaacagatggtc attttatttcggtcttaggtccatatctggcaaaggacaatgacgcatcaattttgaagaacgctttgctaagaaacgta gacgagatgagggaatggctagacgaggaggatattttcattgtggatcgggggtttagagatgccctgccgtatttgaa agaattaggcatacaagctgaaatgccgaccttcctgaggaaantggatgataagaatttgcatcgtcgctctgcatcat gggtggcaatggaggaaataaaagatttccctaggttagatgaggagcagttacggttcctgacatgtggaacataccaa ttaaagttaagcgcaaactacacgcaggaacatctagacggcaactgtgacatccatggacataaagatgaaaacgggtt gttgcgtgttagaatacggagcaggcatgtctccgcaaagacatacttgttgtggattcgatatgacgaatgttacgtca cagcttggtactgcaggtgtcgcgccggctccagggttgtcggtatgtgtgctcatgtggctgctgtcatttggttcctt gggaatggtcgtcatcagcagacagagaaatatggagtccaagactggagtacattcttgcaggatgcatcaaaagtccc tgaagctgtcgatcaatcagatgatgaagagaatatcgatacagaggaataa |
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Protein
| Protein ID | pfu_aug1.0_3851.1_30548.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3851.1_30548.t1 MPYRKQKLNVLYKASSDISVIKGDALIELLQYLRTTALRHEKTRINFDDERSLSDEEYLSLLGVGKAAFKDMLTYLDGLV RNTPARSTKTSLAIFLLKMRSGMSNKMLSTVFNVSKSSIRRCISNVSNVLKEKFVSESLGFQSISRSDVINNHTRKLAQT LFCDDGKSQAVLVLDGTYIYIQKSGHFRFQRQSFSIHKGRPLVKPMIIVSTDGHFISVLGPYLAKDNDASILKNALLRNV DEMREWLDEEDIFIVDRGFRDALPYLKELGIQAEMPTFLRKXDDKNLHRRSASWVAMEEIKDFPRLDEEQLRFLTCGTYQ LKLSANYTQEHLDGNCDIHGHKDENGLLRVRIRSRHVSAKTYLLWIRYDECYVTAWYCRCRAGSRVVGMCAHVAAVIWFL GNGRHQQTEKYGVQDWSTFLQDASKVPEAVDQSDDEENIDTEE |
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