Gene
| Gene Model ID | pfu_aug1.0_3859.1_08742 |
|---|---|
| Locus | scaffold3859.1 : 6156 ... 9705 : - |
| To GenomeBrowser | scaffold3859.1:6156..9705 |
| Genes list of scaffold | scaffold3859.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3859.1_08742.t1 | 1 | 1 | SH2 | 43 | 136 | 1.6e-11 | 43.8 | 2.1e-15 | 3.1e-11 | 42.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3859.1_08742.t1 | gi|324500643|gb|ADY40296.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3859.1_08742.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3859.1_08742.t1 atgacaggtcaaagttcaccaagtgtctactttggtctgtcacgaagaggaagcatctcatcattggcagaatctgtgga tgccacccacaccacacctcgctttgtcaaggacacgtctaaatactggtataaaccccacatctctagagaagaagcta ttgcagttttaaaagacaagcctcctggcacctttatcgtacgtgatagtaactcattcccaggggcttttggtcttgcc ttaaaagtagctacgctccccccgaatgtccagacaaagtccacgggggatccagcggcggatctcgtccgtcacttcct tatcgaaccgacacccaagggggttaggttacgaggatgcagcaatgaacctgtttttgggagtttagcttcattggtgt atcaacactcaatcacacccctagcactgccatgtaaactagctctacctgatattgatcaatcagtagaggtgagcacg atggacagctctatgacgtcagagttaccaagctcagccgctgctctgttggcacaaggagctggtaagtattcatatac agtaatggtaacagtaaaattaacagtaaaatga |
|
Protein
| Protein ID | pfu_aug1.0_3859.1_08742.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3859.1_08742.t1 MTGQSSPSVYFGLSRRGSISSLAESVDATHTTPRFVKDTSKYWYKPHISREEAIAVLKDKPPGTFIVRDSNSFPGAFGLA LKVATLPPNVQTKSTGDPAADLVRHFLIEPTPKGVRLRGCSNEPVFGSLASLVYQHSITPLALPCKLALPDIDQSVEVST MDSSMTSELPSSAAALLAQGAGKYSYTVMVTVKLTVK |
|