Gene
| Gene Model ID | pfu_aug1.0_3859.1_08743 |
|---|---|
| Locus | scaffold3859.1 : 9827 ... 18535 : - |
| To GenomeBrowser | scaffold3859.1:9827..18535 |
| Genes list of scaffold | scaffold3859.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3859.1_08743.t1 | 1 | 1 | SH2 | 235 | 328 | 4.7e-11 | 42.3 | 7.3e-15 | 1.1e-10 | 41.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3859.1_08743.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3859.1_08743.t1 atggaagaaaatgaaagaatacgaaactatttggaaaataaccttattgcaaaaatacgaaactttctctttccaacagc tggtagctcccgcgttgtagaagttcagaggtcaccatcgcaaccccagcaaccacagcaattctctcagcaacaacagc agcaacaagagtaccgatacgagtaccagactcagtacaacactagcggccagcaacaaaatcaagggcagataactcaa cctatccccttagattcgccccctagcgggtttggtcatcaacacggtcaaataagtcagcctgtgcctgtagcagcgcc acctagcggctttggacaacaacaggagtactcaactcagcagcggcagtacacccagcgatcttaccaacaggaagggg gcgggaccctgcacgtggacaccagccccaaaatgctctcccctggaacagcctctagtacaatgacgcgaagtccttca agtccccattcaccggacacgctaaactcactacgtcagcagttaaatgtggcccataatatgtcaacaggagccgtgag tcctgtgtcgcactccatgacaggtcaaagttcaccaagtgtctactttggtctgtcacgaagaggaagcatctcatcat tggcagaatctgtggatgccacccacaccacacctcgctttgtcaaggacacgtctaaatactggtataaaccccacatc tctagagaagaagctattgcagtgttaaaagacaagcctcctggcacctttatcgtacgtgatagtaactcattcccagg ggcttttggtcttgccttaaaagtagctacactccctccgaatgtccagacaaagtccacgggagatccagcggcggatc tcgtccgtcacttccttatcgaaccgacacccaagggggttaggttacgaggatgcagcaatgaacctgtttttgggagt ttagcttcattggtgtatcaacactcaatcacacccctagcactgccatgtaaactagctctacctgatattggtaagta tgatacagtcagagtcagggangactag |
|
Protein
| Protein ID | pfu_aug1.0_3859.1_08743.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3859.1_08743.t1 MEENERIRNYLENNLIAKIRNFLFPTAGSSRVVEVQRSPSQPQQPQQFSQQQQQQQEYRYEYQTQYNTSGQQQNQGQITQ PIPLDSPPSGFGHQHGQISQPVPVAAPPSGFGQQQEYSTQQRQYTQRSYQQEGGGTLHVDTSPKMLSPGTASSTMTRSPS SPHSPDTLNSLRQQLNVAHNMSTGAVSPVSHSMTGQSSPSVYFGLSRRGSISSLAESVDATHTTPRFVKDTSKYWYKPHI SREEAIAVLKDKPPGTFIVRDSNSFPGAFGLALKVATLPPNVQTKSTGDPAADLVRHFLIEPTPKGVRLRGCSNEPVFGS LASLVYQHSITPLALPCKLALPDIGKYDTVRVRXD |
|