Gene
| Gene Model ID | pfu_aug1.0_3864.1_08749 |
|---|---|
| Locus | scaffold3864.1 : 1 ... 5465 : - |
| To GenomeBrowser | scaffold3864.1:1..5465 |
| Genes list of scaffold | scaffold3864.1 |
| Synonym | pfu_aug2.0_193.1_10414 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3864.1_08749.t1 | 3 | 1 | zf-H2C2_2 | 18 | 33 | 2.4e-07 | 30.7 | 8.7e-05 | 0.43 | 10.9 |
| pfu_aug1.0_3864.1_08749.t1 | 3 | 2 | zf-H2C2_2 | 39 | 65 | 2.4e-07 | 30.7 | 3.2e-09 | 1.6e-05 | 24.9 |
| pfu_aug1.0_3864.1_08749.t1 | 3 | 3 | zf-H2C2_2 | 67 | 73 | 2.4e-07 | 30.7 | 0.87 | 4300.0 | -1.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3864.1_08749.t1 | gi|224088707|ref|XP_002194058.1| | 4.0e-28 |
Transcript
| Transcript ID | pfu_aug1.0_3864.1_08749.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3864.1_08749.t1 atgtggacaaagataactgagcttcaaatgaatatatcttgtttatttccaggggaacgaccgtacaattgtgactatcc tggatgtgataaagcattctgtcagagtggacagttaaagactcaccagcgcctccatacgggagagaaacctttcatgt gctcagaacaaggttgcccaagtcgttttacacatgccaatcgtcattgcgcggaacatccctatgctacactggttcga atcaaactggatggatcccttcaagacctgatggcactcagagaccaggaaactaataatgctgtcagggaatggctaga cttacaaatcgcagtacgacaagaaagatgtgggagagggggaagatccaaaaagaaacgtctattcagtgaagatacag actctcaaagctcatccccagacagtaagatgcaaatgattacgaacaacaatgagtacaaggtacctgaacaaaccgag ccgatgacaaacggtcacattccgtccatgacacatgaacaaatgtatcaaccacagatcaaaaccgaaattaaatatga accagctatagacaacaatcagtactttccacaggtcagtgaatataaaacgcctatgtactacaatgactacaatcagt atcctatgtacaatatgcaacctgtacagaatgactatcaagacatgcatcatcaacatcattacgttccgcaggaagat tataaaattcacaaagacccattctataatgtgcaacctgtggagatgtacaataacatggaacccgcaaatgtagaata ctcaatcaccgaactccaacccgcaaccgccccgattaaaacggagaaacaggaaggggaaatgacgctcagtcaaaatg ctgacaagtggatttctgccttggcattggtggaattatcacatggggaactatga |
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Protein
| Protein ID | pfu_aug1.0_3864.1_08749.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3864.1_08749.t1 MWTKITELQMNISCLFPGERPYNCDYPGCDKAFCQSGQLKTHQRLHTGEKPFMCSEQGCPSRFTHANRHCAEHPYATLVR IKLDGSLQDLMALRDQETNNAVREWLDLQIAVRQERCGRGGRSKKKRLFSEDTDSQSSSPDSKMQMITNNNEYKVPEQTE PMTNGHIPSMTHEQMYQPQIKTEIKYEPAIDNNQYFPQVSEYKTPMYYNDYNQYPMYNMQPVQNDYQDMHHQHHYVPQED YKIHKDPFYNVQPVEMYNNMEPANVEYSITELQPATAPIKTEKQEGEMTLSQNADKWISALALVELSHGEL |
|