Gene
| Gene Model ID | pfu_aug1.0_3864.1_08751 |
|---|---|
| Locus | scaffold3864.1 : 8796 ... 15902 : + |
| To GenomeBrowser | scaffold3864.1:8796..15902 |
| Genes list of scaffold | scaffold3864.1 |
| Synonym | pfu_aug2.0_193.1_10413 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3864.1_08751.t1 | 3 | 1 | HABP4_PAI-RBP1 | 34 | 85 | 1.7e-11 | 44.5 | 0.012 | 180.0 | 2.6 |
| pfu_aug1.0_3864.1_08751.t1 | 3 | 2 | HABP4_PAI-RBP1 | 142 | 159 | 1.7e-11 | 44.5 | 1.0 | 15000.0 | -5.8 |
| pfu_aug1.0_3864.1_08751.t1 | 3 | 3 | HABP4_PAI-RBP1 | 163 | 200 | 1.7e-11 | 44.5 | 1.2e-15 | 1.7e-11 | 44.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3864.1_08751.t1 | gi|340717575|ref|XP_003397256.1| | 3.0e-13 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3864.1_08751.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3864.1_08751.t1 atggacgcacaatacggcatagcagttactaataaatttcagctcttcattgacgaagatgctgacccgttcgatatcct cagtcagcaggaggagcagaagaagaaggaacccaaagagaaggagaagggtaaaggcaaaaacaaacagggcaagagca aaaatgttctgcagtcagacaccaagaataagcctgttgaacagactatccaaaagaaagaagagaagcccagtaaccag gctccaccaaggcaagataggcctccaaggagtgcccgtatgaacaaagagttcaaagatcgcgaggaaggtgacaggag gcctaggagaagggatgaaaatgtacccccagagttcagggaaaagtcagaccgtgatgttggacagtcaggattcaaca gaccagaaagtggtagagggtttggcagaggtcgtggccggggaggtcgtggaggaagaggtagaggtggattcggagac cgtccaggaaaacgagattttgaaaggcacagtggcagtgaccgaaccagtggtgtaaaaccaacggacaaaagagacgg aggtggatcgcacaactggggcacatataaggatgatttgcagtga |
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Protein
| Protein ID | pfu_aug1.0_3864.1_08751.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3864.1_08751.t1 MDAQYGIAVTNKFQLFIDEDADPFDILSQQEEQKKKEPKEKEKGKGKNKQGKSKNVLQSDTKNKPVEQTIQKKEEKPSNQ APPRQDRPPRSARMNKEFKDREEGDRRPRRRDENVPPEFREKSDRDVGQSGFNRPESGRGFGRGRGRGGRGGRGRGGFGD RPGKRDFERHSGSDRTSGVKPTDKRDGGGSHNWGTYKDDLQ |
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