Gene
| Gene Model ID | pfu_aug1.0_3871.1_52108 |
|---|---|
| Locus | scaffold3871.1 : 1183 ... 8795 : - |
| To GenomeBrowser | scaffold3871.1:1183..8795 |
| Genes list of scaffold | scaffold3871.1 |
| Synonym | pfu_aug2.0_111.1_03637 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3871.1_52108.t1 | 1 | 1 | PDZ | 7 | 55 | 1.6e-07 | 31.3 | 5.6e-11 | 4.2e-07 | 30.0 |
Transcript
| Transcript ID | pfu_aug1.0_3871.1_52108.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3871.1_52108.t1 atgatctcagattatattgcccagataaaacgtcttttaccaagtggagcggcttccaggagtgggcaattaaaagtcgg tgatagactcatatcgtgcaacggacatagtcttcgttctgtatcacagcaacagtgtctaagcatactcaaaacggaag caaacaacggggacttggaaatcgaagttctaagacaaacagaggcgcacgatcaatgtctggaaatatcagttcaggtg ccgaatcgcgcaggaatcgctggcggttataactcaactctgactctcaggtctccgaattttgaacgaaaggaaatacc gttttctgactttgctgaaaccgatagtgataatgaagttgtgctcaataaatacaattttctgaatgatcaaacacggt ttgacaaacagtcacaggatattaatggcaagggtatagttgggggaaattctccggatcatgaacataaccatgaatca agacttggcttagattcctctacaagcagtgttgtggacaaacccgtgatacatcaaaggaaagcagactacgtgtcgtc tgcaagcaaggtcgacaagactgatcaagacaacaaaggtccaattgataccgtgatatttgcatctatcaattctcagc agaagtctgattttgtatcttcagcaagaaaatctttaggggaggtcagtagttacgacaagaaaaaagaagaacccgaa cctaaattaattccaaaaggtcaaatcgattacgtatcgtcatcacaggcaaagaaaactccacctccggttctaccaag atctaaagatacacaggcaacaccgaaaccaaacgacattgaaatttcaccctatgcgtacgaagaaccacctacaacca agatccaaccagtgaaactcaactccgcacttagccctagaggaaaacgaaatgatggtgcttttagttttggtacgaag tttggaaagagtcctgataaacaaggtaaatcaccggtgtcgtcgcctctttcttcacctcgctcattgggagacccttc ccctagtgtctctcctcggtcaccaaaatcaacggagatttctcacagcaagtcgcatggaacaccaccgccagtgtcac ctaagccatctccttcaccgcgcaatattagcaaagcactagagcccacagaacaaaatgtgcatgctgaacctacacat gagaagcatgagggtcaaacacatgaccatacctctgatacaccaactcaagaagcgattgttgtagctatttccaacga aacttcagaatcatctccgcatgaagagattactgaagtttcaacttcggaattaagtgttcagagcacagcatgtgaag ttcctttggcgcccgtgcatgaagctgaaggtaaaactgaatcgtgtatcgatgtatcgcataaagtcacaaacatactc gatgacaccaatatatctgtaccttcacaaagcacagacgcattgcttattcctagcacaacgcaacacgcaccttctcc caatgaacaaagcacaaatgacaatgaacaatatagtgttgacaatgagttggacagtaaagagcttgctctgaataacg ttgacgacagtgaacaaacgcttaaagaatttgctttaaaaattgtaaataatgctattcaaaatgggttagaggaagtg aaaagagaagaagcagagcttaaacatgatactgtaaatgacctggatttagttcatctagatattgcaggtaagagcga ttcgcagctagatgttttggtggctggttcggggcatgaggtaaaatctccaacacacataatggacgcttcgcctttgc gtgcttttctacataaaatgagcgatgccaatgaaagctcgtcatcccaagacatgtcgcaaaacgacgcagtaaataca cctccccctgctctgccgacaaacgctccgcctgaaatttcaccttcatgtttaaatgctgttgcaggcaatttagctaa tgaaatggtgaaggagagcgaacttgaaattgaacctcaaaatttacctcagctacaatcttttgttcatcaaagtggtg ctcttgatactaacaatgtaaactctaacgattcgagacttgatggtgatacgtcgggtacaaattcttgcatgtctgat gttttgcctgcaagtactctagcatgttctattgtcactgaatccatccaacctttagattcttttaagcatgttgaaca tttgaattcagaaaacactgaaacagttgacacaaatgaatatccttctccacaggaagaggtgcaggacgacaaaggaa gtcgtaaaaatgaaagcggaaatatcgaaagtgaaaataacaatttatcggtggaggggcttaagagcaatgacgtcatg tctgaaattcaaaactcttttagtgaaatagaaaataaaataaacgccgttgaaactgtgttgaaatcgaatcctgattt agcttccgaagatatttctaattcaagtgatccttcagaaaatatttcaaattttgataaaccctttgttgctgaggaat tagcaatggacgaagaaatttcatttccaaatagtaatattgacgagaaagaggatataaacgtaccggatacaacatct gtcaatggtgttgttgaaaattcagaaacaagtgattatcccggcattactagtcttagaaaatggtcgattgttctcaa gcaaaatgaagtagccaacgaggacctgacctcgcagcattttgtgacattatcaccggacaagttgtcaaggttactgg aagatgtaaatcgttcaatggatagggctgggcattctgtggaagacaagatcattataaatgtgatctgcagagacggg tatcaacgtttgcctttgggaattactgtggcgcctgcaaaggacggagtgtgtaaagtaagcattcacccacttttcta g |
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Protein
| Protein ID | pfu_aug1.0_3871.1_52108.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3871.1_52108.t1 MISDYIAQIKRLLPSGAASRSGQLKVGDRLISCNGHSLRSVSQQQCLSILKTEANNGDLEIEVLRQTEAHDQCLEISVQV PNRAGIAGGYNSTLTLRSPNFERKEIPFSDFAETDSDNEVVLNKYNFLNDQTRFDKQSQDINGKGIVGGNSPDHEHNHES RLGLDSSTSSVVDKPVIHQRKADYVSSASKVDKTDQDNKGPIDTVIFASINSQQKSDFVSSARKSLGEVSSYDKKKEEPE PKLIPKGQIDYVSSSQAKKTPPPVLPRSKDTQATPKPNDIEISPYAYEEPPTTKIQPVKLNSALSPRGKRNDGAFSFGTK FGKSPDKQGKSPVSSPLSSPRSLGDPSPSVSPRSPKSTEISHSKSHGTPPPVSPKPSPSPRNISKALEPTEQNVHAEPTH EKHEGQTHDHTSDTPTQEAIVVAISNETSESSPHEEITEVSTSELSVQSTACEVPLAPVHEAEGKTESCIDVSHKVTNIL DDTNISVPSQSTDALLIPSTTQHAPSPNEQSTNDNEQYSVDNELDSKELALNNVDDSEQTLKEFALKIVNNAIQNGLEEV KREEAELKHDTVNDLDLVHLDIAGKSDSQLDVLVAGSGHEVKSPTHIMDASPLRAFLHKMSDANESSSSQDMSQNDAVNT PPPALPTNAPPEISPSCLNAVAGNLANEMVKESELEIEPQNLPQLQSFVHQSGALDTNNVNSNDSRLDGDTSGTNSCMSD VLPASTLACSIVTESIQPLDSFKHVEHLNSENTETVDTNEYPSPQEEVQDDKGSRKNESGNIESENNNLSVEGLKSNDVM SEIQNSFSEIENKINAVETVLKSNPDLASEDISNSSDPSENISNFDKPFVAEELAMDEEISFPNSNIDEKEDINVPDTTS VNGVVENSETSDYPGITSLRKWSIVLKQNEVANEDLTSQHFVTLSPDKLSRLLEDVNRSMDRAGHSVEDKIIINVICRDG YQRLPLGITVAPAKDGVCKVSIHPLF |
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