Gene
| Gene Model ID | pfu_aug1.0_3871.1_52109 |
|---|---|
| Locus | scaffold3871.1 : 9638 ... 15725 : - |
| To GenomeBrowser | scaffold3871.1:9638..15725 |
| Genes list of scaffold | scaffold3871.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3871.1_52109.t1 | 1 | 1 | PDZ | 176 | 244 | 4.7e-09 | 36.3 | 1.3e-12 | 9.4e-09 | 35.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3871.1_52109.t1 | gi|260797064|ref|XP_002593524.1| | hypothetical protein BRAFLDRAFT_125231 [Branchiostoma floridae] | 2.0e-12 |
Transcript
| Transcript ID | pfu_aug1.0_3871.1_52109.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3871.1_52109.t1 atggagagtgacggggtcacggattcggacctgtccgactgggaatcccggcagttcggacggacaaccctcatgtctcc tccacttgttaaatcagggacggacaaacagccaccaagctcccctgcgaaacgaagttatccgactatgtttaattcag gtttcgactccatggaattcaatcaggaactctatccgaaaagaaaaccgaatttcccatgggatccggaaaaagagaac aaatattcctcaaactggaataattctgtgtcttcaagggatagtgccatcaccggttctttattcagtacttttggatc tgctttgacagaaagttcaagttcttttgagagcgcaagcaatacggacgaaactgcctcaaatataagttcaccgtcac gcattttgtatggaacgtataacaaaatttccggcgacggaaaaggtagcgagtcggagtccggggacagtgataccgag gtcttggtgttacatcggttacctggtgaaaacatcggtatgatcctggggatcgataaaagtaatgacaataagcgtgt ttccaaagttttcgtaaaaacggttacaatagggggtgctgcacatcgagcgactggtggtacgagaggggttcaaattg gcgacgaaatactccagataaatggaactgatattaatactctaacacacgacgaatgcatcagtgtactcagggaaatg cccttgagggtcatactcaaaattaagaggtccaaactccgacccgtccaaggttccccggcggcctcggtcaaaagtct ctctagttaccaaaatggtcatagctcaagtcaatactcagaatcctcggtttactcggagagtgaggatgaaaacatag caccagataaaatcgaaggcttcaaactacatcgggcggaaattgataaggatcccgaggaaagcctnccttcctcaaga ttttttttgtatttttggcattcagtgatactatttgtcgacattgcgaccaaaatacggcaataa |
|
Protein
| Protein ID | pfu_aug1.0_3871.1_52109.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3871.1_52109.t1 MESDGVTDSDLSDWESRQFGRTTLMSPPLVKSGTDKQPPSSPAKRSYPTMFNSGFDSMEFNQELYPKRKPNFPWDPEKEN KYSSNWNNSVSSRDSAITGSLFSTFGSALTESSSSFESASNTDETASNISSPSRILYGTYNKISGDGKGSESESGDSDTE VLVLHRLPGENIGMILGIDKSNDNKRVSKVFVKTVTIGGAAHRATGGTRGVQIGDEILQINGTDINTLTHDECISVLREM PLRVILKIKRSKLRPVQGSPAASVKSLSSYQNGHSSSQYSESSVYSESEDENIAPDKIEGFKLHRAEIDKDPEESXPSSR FFLYFWHSVILFVDIATKIRQ |
|