Gene
| Gene Model ID | pfu_aug1.0_388.1_00286 |
|---|---|
| Locus | scaffold388.1 : 39703 ... 62350 : - |
| To GenomeBrowser | scaffold388.1:39703..62350 |
| Genes list of scaffold | scaffold388.1 |
| Synonym | pfu_aug2.0_68.1_26775 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_388.1_00286.t1 | 2 | 1 | Pkinase | 10 | 59 | 2.5e-06 | 26.8 | 3.4e-10 | 2.5e-06 | 26.8 |
| pfu_aug1.0_388.1_00286.t1 | 2 | 2 | Pkinase | 160 | 184 | 2.5e-06 | 26.8 | 0.6 | 4400.0 | -3.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_388.1_00286.t1 | gi|47230624|emb|CAF99817.1| | unnamed protein product, partial [Tetraodon nigroviridis] | 2.0e-16 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_388.1_00286.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_388.1_00286.t1 atcctatagaaaggtaccattcttacttttcagaaaatgacgacgttaagagaacgaccttgagagaattacgtatgtta cgtacgttaaagcaggagaacatagtggacctaagagaagcttttaggaagaaaggaaaactctacctggtctttgaata tgtggaaaggcaaacccttcagcttgatcctgatgatcgtttctgtatagacgactgtctggaacaccctgctttccaaa cggagcacctgctgaacagaaaccatgtacagatacgacgagttagtcctcaaagtgctagtaaaaaacgcaaaaacaac tatactgaccaagtcaaaagtgagaatttaaagaatctccaaagcaactacagacctgataccgggaggtcacagaaaat ggtcgtagttgttgaacgacaagaagaaaaaatggatgtagaagatgacgtttataattctcctgccaaaagtaaataca taaaacaagctaaaaacgtgtcgaaaagcaatgccgaaaaaatagcaagtcaaagtgaaacaaaggtgctaagagatgca gaaaaagctgaaaaagtgaactctacaagtgaaaaatatactgtacagccgaaatctgcatcacaaaagtcaggtgcatt aagttcaaaatcagccaatcaaggccacagttacaaagccagtagggaaaactttgaggaaaaaatcagctcaagtagag acgctttaagcggtaaaagtgtgaaagatatcgaccacaaacattccacgtcacatgttaatggagtggaaaaagtgata actgctgatacaagacagcctgccagaatagtgaaaatagaaaaagtggtgacggttgataataaaactctaaaacaggc caatgaaactgcagggagacatttatcaacattctcagatttcagaaatccagtaatggatgaaagtccagacacgtcac gttcctccgtagatgagagtacaagtacatcatgtacaacatgtacgacaaacagtgaaaacagtgccccctctactata gatactttagatctatccattagtcacagtgaatctaaatatcttaaaaataaagacagtgttaaggtttctccgaaaat ggaatttcaaatccataagcctagtcctgagccagattctctgcaaaccacaccacgagatcccaagtctaattactatg taacaactagcaggtcaagtacttacactgtcaacctgcaggcgcctaatcagtatcagggggaggtaactaatgaccag gtagaggatcaaggagtacatcatgagaggaaaaagtttttagatcgggcaacacaggaggaattacagaggattaaatc cagcacactgggacgcaaaaaagctgataaaaatcatcagggctcctttatacagacaatcactgatagactctcggatg ccaagttacaaaatcatgaaatctcagtaccgcagcagcatacgtcaaaataccgagaaagtagctttgttaattacgca gggaagtcacaagccaataaacgcaacaggaatcctcaatatgatattggttttcatcgagagcagacaaatattaatgc tggaggtccacccgttcaagtacggtcccacagcaagtatatgaccttgaactcctaccaaaataacacagactcatcat caagtccatacagtcatcagagaggttaccatgacaactcaggatggcgacaagcagagggagctaatgattggcaaggg ggaggtaactcagcaggaactttacagcaattagcaaggaagaaaaagaagaaaaaattcttacagattcttgccaatga gaatgctggacgtatgactcccaatatgcgtcttcacatgactccatcacgagtgagccgtatggactacgatatgatgg atgacgacacggagggacaaatctccgcaagggaaccccttcagaactcctctagagagtacctagctaaagatgcttat gacaataagcatagatatgagaaacaacaaatttcacttcgacatcgcaccaaaacaccagtagataagtccacacgact acagccgttacaaaaacctccctcccatctcggcagtctggcacccagtacaactcacatagaaccaacatggccgtacc acaataaatcagagactgatactaggacattacaaactgtgtcgggtattgaccttcgacctggatggctttctcgtcca ggctccgtgctagacaatgaaacaccagacttttatagcccgcgtgagcaaggcgacctaaaaccactcaaaagtgcaaa gtcaacacgcgtgctccacgaatacagaggtgtaagggactga |
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Protein
| Protein ID | pfu_aug1.0_388.1_00286.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_388.1_00286.t1 PIERYHSYFSENDDVKRTTLRELRMLRTLKQENIVDLREAFRKKGKLYLVFEYVERQTLQLDPDDRFCIDDCLEHPAFQT EHLLNRNHVQIRRVSPQSASKKRKNNYTDQVKSENLKNLQSNYRPDTGRSQKMVVVVERQEEKMDVEDDVYNSPAKSKYI KQAKNVSKSNAEKIASQSETKVLRDAEKAEKVNSTSEKYTVQPKSASQKSGALSSKSANQGHSYKASRENFEEKISSSRD ALSGKSVKDIDHKHSTSHVNGVEKVITADTRQPARIVKIEKVVTVDNKTLKQANETAGRHLSTFSDFRNPVMDESPDTSR SSVDESTSTSCTTCTTNSENSAPSTIDTLDLSISHSESKYLKNKDSVKVSPKMEFQIHKPSPEPDSLQTTPRDPKSNYYV TTSRSSTYTVNLQAPNQYQGEVTNDQVEDQGVHHERKKFLDRATQEELQRIKSSTLGRKKADKNHQGSFIQTITDRLSDA KLQNHEISVPQQHTSKYRESSFVNYAGKSQANKRNRNPQYDIGFHREQTNINAGGPPVQVRSHSKYMTLNSYQNNTDSSS SPYSHQRGYHDNSGWRQAEGANDWQGGGNSAGTLQQLARKKKKKKFLQILANENAGRMTPNMRLHMTPSRVSRMDYDMMD DDTEGQISAREPLQNSSREYLAKDAYDNKHRYEKQQISLRHRTKTPVDKSTRLQPLQKPPSHLGSLAPSTTHIEPTWPYH NKSETDTRTLQTVSGIDLRPGWLSRPGSVLDNETPDFYSPREQGDLKPLKSAKSTRVLHEYRGVRD |
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