Gene
| Gene Model ID | pfu_aug1.0_38877.1_55686 |
|---|---|
| Locus | scaffold38877.1 : 5 ... 8445 : + |
| To GenomeBrowser | scaffold38877.1:5..8445 |
| Genes list of scaffold | scaffold38877.1 |
| Synonym | pfu_aug2.0_402.1_07461 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_38877.1_55686.t1 | 1 | 1 | Exo_endo_phos_2 | 78 | 205 | 1.6e-08 | 34.2 | 8.1e-12 | 4.0e-08 | 32.8 |
| pfu_aug1.0_38877.1_55686.t1 | 2 | 1 | RVT_1 | 511 | 563 | 4.9e-18 | 65.2 | 3.4e-11 | 1.7e-07 | 30.8 |
| pfu_aug1.0_38877.1_55686.t1 | 2 | 2 | RVT_1 | 623 | 673 | 4.9e-18 | 65.2 | 1.2e-11 | 6.0e-08 | 32.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_38877.1_55686.t1 | gi|291240505|ref|XP_002740159.1| | PREDICTED: uncharacterized protein K02A2.6-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_38877.1_55686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38877.1_55686.t1 atgaaatcgagcaagcctggtatttcaacggatacacacttacttaattctgatgatgcttctgttcatacacaatgggg atttgataacatattatgtcaaggaaaaaacgatgcgcgtggggttatgaacttatttctaaacaattttgaatacaagt tattaagaacgaagaaggacgataaaggaaatttactagtcgttgaaattgagatttgtagcaaaataaaaattacactt gttaacatttatggtccaaataaagatgaacctagcttctttgaaaatatacataacattctatgtgattttgataatga ttttgtaattttatgcggtgactggaacctaacacaagattatgataaagattgctttaattatgtcactcacaactatc caaacagtagatctgaagtagcaaaattgaaagaaaattttaatttagttgatccatggcgcatttcttatcctgataag cgaattttcacttggcatcgcacgaatccagtaaaacaagcgcgtcttgatttcttcttaatttctaacgagctcatgtc tctggttaactcagtccgaattctacccggttacaggacagatcactcttatatagagttagaattgaagatatcagatt ttgataaaggacctggtttctggcgattcaataattctctcctgaaagaaaaagactatgtcgacttggtcaaagattgt atccttgaaacaaaaaaagaatatgttccgattcctattgttaaagatatggtatgtgaaattccaaatgatgcgcttcc gcttacaattgatgacgatctattcttagaaacgttactcatgaatataaggaaaaggactttaccttattgctctaaac gaaaaaaatataaaaaggaagaaaaagatcaaattgaaaatgatatagctgaaacaaaatcacagctcgatcttcatcat gataacgatttagctttaattttagataatttgagtaaaaaattagaagatatcagaaaagaagaaatggaaggtctaat tgttcgtagccgagcgcaatggatagaaaatggagagaaacctacaaaatatttttgcagcttagagaaaagaaattaca taaataaaactatcactaaagttgttaacgacgatggtcaggaaatcagaaatcaaacggatattttaaatgaaattaag atattttatcagaaactttatacaagtaacgacacttgtttacatgatgttgatttagatattcttttatccgattatga agtacctaaattaacagaaaatgacaaattattccttgaacaaggtctcactaaaacagaaatcttacaatccttaaagg catgcaaaaataataagacacccgggactacgggctttaccgccgagttttacaaatttttctggtcagatatcggcgat tttctttaccgttcgtatcaatcatcattcaataagggcgaattatctatctctcaaaagctaggaataatatcattatt accaaagggtgacaaaccgcgtcaatacttgaagaattggaggcccatatcgctgttaaatgtgacatacaaaattttat cgggagcaattgctaaacgaataaaatctgttttaccacacattatacatgagaatcaaaaaggtttcctttctggcagg tatattggagagaatacgcgtcttatgtttgagttagcgcctgaatctcgcaatataactacatttacaacgcatgtagg actacgacgttacaagcgacttatattcggattaagtagtgcagctgaaaagtttcaaagtatcatgcgtgacagtctag aaggcatagaaggcatccgaaacttaagtgatgatattatcgtacatgcgaaaactcaagaggagctcgatgattgtttg aaggctaccctgcaaagattgcgtgaaaggaacattacattaaacaagtcgaaatgcaaattcaatcgagacaaagttga gttctttggatacgtcttttcaaacaaaggattgtcagcagatccaaggaacataactgcgattaaagaagcgaaaccac cagcgaacgtgtccgagttacgtagtttccttggactggctaattatgtatctcgtttcatacccgactttgcgagtata gttgctccgttacgtaccttaacacacaaaaatgtcacatggagatggggaaaagtagaaaatgaagcgttcaagaagct gaaaaacagtttgatagaagatgttatggaatattttgacccgtctaaacagtcaaaattagtggtagatgcatccccag taggattaggtgcaattttgatgcaggaagggaaagttatttcgtacgcaagtaaaacgttgtcagacgtagaatctggt tactcacagacagaaaaagaggctttagcgatagtttgtggctgtgagcattatcatctttacttgtatggaagctcatt tatgttatacacggaccataagcctttggaagtaatttttaataaccccaaaagccgtccaccagcgagaatagaacgtt ggcgtttaaggttacaaccttatgacttcatagttaaataccgaccaggaaccgaaaatccagcagatttcatgtctaga caactgatcgactctattgatagcaaaagtcagaggcattcgaaagttgcagaggaatatcttagtttcatagtggaaca aacgactccgaaagctatgacactgtctgagatatctgttgccacaaaacaggacagagttctacaaaacgcaatgaact gtctagttaaaggaaattggagttcagttgactcaacaagtgaaacttatccatatttgagagtcaaagagcagcttagt attgcaacagttcaggaaggaagcattctattattcgatacacgcatagtagtaccgaagcagtttcaacaacgagttgt gaatttggctcatgaaggtcattaa |
|
Protein
| Protein ID | pfu_aug1.0_38877.1_55686.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38877.1_55686.t1 MKSSKPGISTDTHLLNSDDASVHTQWGFDNILCQGKNDARGVMNLFLNNFEYKLLRTKKDDKGNLLVVEIEICSKIKITL VNIYGPNKDEPSFFENIHNILCDFDNDFVILCGDWNLTQDYDKDCFNYVTHNYPNSRSEVAKLKENFNLVDPWRISYPDK RIFTWHRTNPVKQARLDFFLISNELMSLVNSVRILPGYRTDHSYIELELKISDFDKGPGFWRFNNSLLKEKDYVDLVKDC ILETKKEYVPIPIVKDMVCEIPNDALPLTIDDDLFLETLLMNIRKRTLPYCSKRKKYKKEEKDQIENDIAETKSQLDLHH DNDLALILDNLSKKLEDIRKEEMEGLIVRSRAQWIENGEKPTKYFCSLEKRNYINKTITKVVNDDGQEIRNQTDILNEIK IFYQKLYTSNDTCLHDVDLDILLSDYEVPKLTENDKLFLEQGLTKTEILQSLKACKNNKTPGTTGFTAEFYKFFWSDIGD FLYRSYQSSFNKGELSISQKLGIISLLPKGDKPRQYLKNWRPISLLNVTYKILSGAIAKRIKSVLPHIIHENQKGFLSGR YIGENTRLMFELAPESRNITTFTTHVGLRRYKRLIFGLSSAAEKFQSIMRDSLEGIEGIRNLSDDIIVHAKTQEELDDCL KATLQRLRERNITLNKSKCKFNRDKVEFFGYVFSNKGLSADPRNITAIKEAKPPANVSELRSFLGLANYVSRFIPDFASI VAPLRTLTHKNVTWRWGKVENEAFKKLKNSLIEDVMEYFDPSKQSKLVVDASPVGLGAILMQEGKVISYASKTLSDVESG YSQTEKEALAIVCGCEHYHLYLYGSSFMLYTDHKPLEVIFNNPKSRPPARIERWRLRLQPYDFIVKYRPGTENPADFMSR QLIDSIDSKSQRHSKVAEEYLSFIVEQTTPKAMTLSEISVATKQDRVLQNAMNCLVKGNWSSVDSTSETYPYLRVKEQLS IATVQEGSILLFDTRIVVPKQFQQRVVNLAHEGH |
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