Gene
| Gene Model ID | pfu_aug1.0_3889.1_44815 |
|---|---|
| Locus | scaffold3889.1 : 29306 ... 38035 : + |
| To GenomeBrowser | scaffold3889.1:29306..38035 |
| Genes list of scaffold | scaffold3889.1 |
| Synonym | pfu_aug2.0_136.1_20293 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3889.1_44815.t1 | 1 | 1 | DnaJ | 7 | 65 | 1.5e-28 | 98.2 | 1.6e-31 | 3.3e-28 | 97.2 |
| pfu_aug1.0_3889.1_44815.t1 | 1 | 1 | DnaJ_CXXCXGXG | 135 | 201 | 6.3e-15 | 54.9 | 5.3e-18 | 1.1e-14 | 54.1 |
| pfu_aug1.0_3889.1_44815.t1 | 2 | 1 | CTDII | 207 | 245 | 7.8e-10 | 38.5 | 0.00015 | 0.31 | 10.9 |
| pfu_aug1.0_3889.1_44815.t1 | 2 | 2 | CTDII | 258 | 292 | 7.8e-10 | 38.5 | 2.3e-09 | 4.9e-06 | 26.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3889.1_44815.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3889.1_44815.t1 atggtgaaggagacgggatattacgatatactaggagtgaaacctaattctacgccagaggaaatcaagaaagcatacag aaagcttgcactcaaatttcatcctgataaaaatcctgatgacccagaaaagttcaagctaataagccatgcatacgaga cactgtctgatcccaagaaaagagaaatttacgacgaaggtggagaggaagccatcaaaggaggaggttctaacactgaa ttccataatccattcgacatattcaatatgttctttggaacaggaggctcgagaaagcagagctcaagaaaagtaaagag tgtggtacatcaacttagtgttagccttgaagatctgtacaatggaacgacgagaaagttagctgtgaagaaaaatgtta tctgctcaaaatgtgatgggaaaggaggaaagcaaggtgcggtagaaaaatgcaaaacctgtaaaggtacaggagtgcag gtacatatacgacgtttaggtccaggaatggtacagcagatgcaggcagtgtgctcagattgtagaggagaaggggagag aatagatcctaaacttagatgtaaaacatgtgaagggaaaaaagtcttacaagaaagaaaaatccttgaggtccatatag ataaaggtatgaaagatggtgaaaacatcaaatttcatggtgaaggggaccaggaaccaggattagaaccaggggatatt gttatagttttagatgaaaaaagacatgacatctacactcgtaaaggaattgatctcttaatgaatatggaaataccatt agtggaagcactgtgtggattccgcaagacaatcaaaacaatggacaacaggacgctagtcataactgctcatccagaat ttttagctcaccttgacgaagttgagtga |
|
Protein
| Protein ID | pfu_aug1.0_3889.1_44815.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3889.1_44815.t1 MVKETGYYDILGVKPNSTPEEIKKAYRKLALKFHPDKNPDDPEKFKLISHAYETLSDPKKREIYDEGGEEAIKGGGSNTE FHNPFDIFNMFFGTGGSRKQSSRKVKSVVHQLSVSLEDLYNGTTRKLAVKKNVICSKCDGKGGKQGAVEKCKTCKGTGVQ VHIRRLGPGMVQQMQAVCSDCRGEGERIDPKLRCKTCEGKKVLQERKILEVHIDKGMKDGENIKFHGEGDQEPGLEPGDI VIVLDEKRHDIYTRKGIDLLMNMEIPLVEALCGFRKTIKTMDNRTLVITAHPEFLAHLDEVE |
|