Gene
| Gene Model ID | pfu_aug1.0_38923.1_41099 |
|---|---|
| Locus | scaffold38923.1 : 503 ... 4805 : - |
| To GenomeBrowser | scaffold38923.1:503..4805 |
| Genes list of scaffold | scaffold38923.1 |
| Synonym | pfu_aug2.0_2769.1_32295 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_38923.1_41099.t1 | 3 | 1 | Ank_2 | 3 | 103 | 7.09996e-41 | 138.4 | 1.1e-13 | 3.1e-10 | 40.2 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 1 | Ank_5 | 34 | 66 | 2.0e-25 | 88.1 | 8.1e-08 | 0.00024 | 21.2 |
| pfu_aug1.0_38923.1_41099.t1 | 3 | 1 | Ank_4 | 37 | 94 | 2.4e-21 | 75.6 | 7.9e-08 | 0.00023 | 21.5 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 1 | Ank | 38 | 66 | 1.7e-30 | 103.2 | 2.6e-11 | 7.6e-08 | 31.7 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 1 | Ank_3 | 38 | 63 | 1.1e-27 | 93.3 | 3.4e-09 | 1.0e-05 | 25.2 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 2 | Ank_3 | 75 | 101 | 1.1e-27 | 93.3 | 0.00067 | 2.0 | 8.9 |
| pfu_aug1.0_38923.1_41099.t1 | 3 | 2 | Ank_2 | 82 | 168 | 7.09996e-41 | 138.4 | 1.1e-24 | 3.1e-21 | 75.4 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 2 | Ank_5 | 82 | 114 | 2.0e-25 | 88.1 | 1.0e-07 | 0.0003 | 20.9 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 2 | Ank | 85 | 104 | 1.7e-30 | 103.2 | 0.0014 | 4.1 | 7.3 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 3 | Ank_5 | 93 | 147 | 2.0e-25 | 88.1 | 2.0e-13 | 5.9e-10 | 39.0 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 3 | Ank_3 | 107 | 134 | 1.1e-27 | 93.3 | 2.6e-09 | 7.6e-06 | 25.6 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 3 | Ank | 108 | 138 | 1.7e-30 | 103.2 | 2.3e-11 | 6.9e-08 | 31.9 |
| pfu_aug1.0_38923.1_41099.t1 | 3 | 2 | Ank_4 | 109 | 160 | 2.4e-21 | 75.6 | 6.7e-15 | 2.0e-11 | 44.0 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 4 | Ank_5 | 126 | 170 | 2.0e-25 | 88.1 | 4.9e-10 | 1.5e-06 | 28.2 |
| pfu_aug1.0_38923.1_41099.t1 | 3 | 3 | Ank_2 | 140 | 203 | 7.09996e-41 | 138.4 | 1.0e-11 | 3.1e-08 | 33.8 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 4 | Ank | 140 | 167 | 1.7e-30 | 103.2 | 1.2e-08 | 3.7e-05 | 23.3 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 4 | Ank_3 | 140 | 163 | 1.1e-27 | 93.3 | 7.3e-08 | 0.00022 | 21.1 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 5 | Ank_5 | 161 | 195 | 2.0e-25 | 88.1 | 0.031 | 93.0 | 3.4 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 5 | Ank | 177 | 202 | 1.7e-30 | 103.2 | 0.018 | 54.0 | 3.8 |
| pfu_aug1.0_38923.1_41099.t1 | 5 | 5 | Ank_3 | 177 | 200 | 1.1e-27 | 93.3 | 0.0089 | 26.0 | 5.4 |
| pfu_aug1.0_38923.1_41099.t1 | 3 | 3 | Ank_4 | 178 | 200 | 2.4e-21 | 75.6 | 0.0048 | 14.0 | 6.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_38923.1_41099.t1 | gi|229582572|ref|YP_002840971.1| | 2.0e-21 |
Transcript
| Transcript ID | pfu_aug1.0_38923.1_41099.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38923.1_41099.t1 atggaagcaataaattctcgcaaggctttgctcgttgacaaactttgctccagcattgtctctagaaaaacaaaatatga gctagacataatagacgacacagaaatggttactccgctatccttggcttgttctaagaatgatatggacattgtaagca tacttcttgaatatggagccaaccctgacgtaaagacaaccatacgtaacagagacaaagcccctatacactttgtttgt gagatcaaggacggaaatgtggagattgtcatcaaattgcttgcagcaggggctgacaaggatttagaaactgttgacta tcagaccccgttacatctcgcctgttctgtcggtaacttcccggctgctaaagtcctgctggacggtggtgccgatgtca atgtattggataacttagggagaacaccgttattactggcatgctaccatagggacttggagatactccagctattggtg gaacatggcagtatggtcgacaattcagatggaatgctagagagctgtcccttaagtgtcgcaatgtcacagaattgggt gtcgggtgtgaggtatttgttaagcaaatcagtagaccttacacaagatgactttgtaacaaaagctgtacagcagggnt cagcaggaaatgctggaattgttacttga |
|
Protein
| Protein ID | pfu_aug1.0_38923.1_41099.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_38923.1_41099.t1 MEAINSRKALLVDKLCSSIVSRKTKYELDIIDDTEMVTPLSLACSKNDMDIVSILLEYGANPDVKTTIRNRDKAPIHFVC EIKDGNVEIVIKLLAAGADKDLETVDYQTPLHLACSVGNFPAAKVLLDGGADVNVLDNLGRTPLLLACYHRDLEILQLLV EHGSMVDNSDGMLESCPLSVAMSQNWVSGVRYLLSKSVDLTQDDFVTKAVQQXSAGNAGIVT |
|