Gene
| Gene Model ID | pfu_aug1.0_3900.1_52123 |
|---|---|
| Locus | scaffold3900.1 : 5303 ... 12775 : - |
| To GenomeBrowser | scaffold3900.1:5303..12775 |
| Genes list of scaffold | scaffold3900.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3900.1_52123.t1 | 2 | 1 | Cadherin | 6 | 62 | 7.2e-12 | 45.4 | 1.5e-07 | 0.0011 | 19.1 |
| pfu_aug1.0_3900.1_52123.t1 | 2 | 2 | Cadherin | 78 | 118 | 7.2e-12 | 45.4 | 3.3e-09 | 2.4e-05 | 24.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3900.1_52123.t1 | gi|242000160|ref|XP_002434723.1| | cadherin, putative [Ixodes scapularis] | 9.0e-13 |
Transcript
| Transcript ID | pfu_aug1.0_3900.1_52123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3900.1_52123.t1 atggcaatctccgagagctctacttttatactggataaccactcaggacaagtgattaccttaaggaaaattgatagaga acttctgaatcattactccctgacggcaatagcaacctatgaaaccgttcatgaaagtgggattagatatcgatttttta cgataacatacgttgaaatcaaagttcttgatgtcaatgataactgtccagattttgtagacgatgctatgtcctgtagt gttccagaaaacgaaattgtaggctcacaagttttcaatcttacagcaactgacatggatgaatggtttaacaaagaaat agagtatgaaatagccaatggtgatcctgaaggcattttgccattgatgcagtttttggtcttgtaa |
|
Protein
| Protein ID | pfu_aug1.0_3900.1_52123.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3900.1_52123.t1 MAISESSTFILDNHSGQVITLRKIDRELLNHYSLTAIATYETVHESGIRYRFFTITYVEIKVLDVNDNCPDFVDDAMSCS VPENEIVGSQVFNLTATDMDEWFNKEIEYEIANGDPEGILPLMQFLVL |
|