Gene
| Gene Model ID | pfu_aug1.0_3902.1_44817 |
|---|---|
| Locus | scaffold3902.1 : 31856 ... 59685 : - |
| To GenomeBrowser | scaffold3902.1:31856..59685 |
| Genes list of scaffold | scaffold3902.1 |
| Synonym | pfu_aug2.0_4404.1_15970 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3902.1_44817.t1 | 1 | 1 | Transglut_N | 49 | 166 | 2.4e-22 | 79.1 | 5.4e-25 | 1.1e-21 | 77.0 |
| pfu_aug1.0_3902.1_44817.t1 | 1 | 1 | Transglut_core | 193 | 272 | 7.8e-10 | 38.9 | 9.5e-13 | 2.0e-09 | 37.6 |
| pfu_aug1.0_3902.1_44817.t1 | 2 | 1 | Transglut_C | 410 | 510 | 3.7e-14 | 52.6 | 1.0e-06 | 0.0021 | 18.0 |
| pfu_aug1.0_3902.1_44817.t1 | 2 | 2 | Transglut_C | 520 | 607 | 3.7e-14 | 52.6 | 3.7e-11 | 7.9e-08 | 32.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3902.1_44817.t1 | gi|296214658|ref|XP_002753714.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3902.1_44817.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3902.1_44817.t1 atgcatcgtgcaaatattttgcaacgaacatcactacggatttcatatcttacggtcgtcatgataaaagtttgtgtttg tcatttgtttgtgcgtattatcttctgttcttgggtactgtacatttggaaaatatcgcatccatcccacaaaactgaca aatatgaacggacgaagttccggtcatctccggaggagggcgtgctccgaccggaactggtggtccgaagaggaaaagag ttcaacattaaggtcaccttcaacgatgaatacaactgtgatttgcatgatcttgaattcacctttacacttggtaaaaa tccttctccaatgaacggcaccctagtttcttgttatatggacgaaactggaaagaaaagcgatgactcggcagagtggt ccgtccgtatcatggacaccgttggcaaagatctgtacgtcggcataacaccaccttgcgactgtatgatcggcgaatgg aacatgttcattgtcaccatctctaaaatgaaggacggagaggttggattgcaatatgaacatgaagaggatattactgt gttgttgaatccatggtgcaaagtgtgtcgcgccattggtcttccatgtaggagcgtcacaaacttcgcttctgctcatg acaccgacaaaagtatgaccatagacagtgtatatgaggaatgtgaagacggctcattaaaccacctaccagagttatca tctgattcggtgtggaatttccatgtgtggaacgaagtatggacagcccgatgtgaccttgaaccagggtttgatggttg gcaggtgatcgatgccacaccccaggagaggagcgaagggcttttcgtctgtggtccaagtcccttggcagcaataaaga agggattaattggcattggatatgatacagcttttataatggctgaagtcaattcggacaaaataagatataaatacgat aggcaaacagaggaatataccaaaattagtgttgaacgagactctgttggaagaaatataagtaccaaaattcccgacgg gaaacccttcaacgataatttatcgtggatggcgttcaaattacgggaagatctcacagattgttacaaatttaaggagg ggtcagatgaggagaggaaagcagtaatgacagcaaacttggcatcaaaagatccgagaaacattgtagataatccagaa aaggatgttgaaataacattagttgacaacgatcacaagatggttggagaggattttgaggtggagatcctagttaaaaa cgtctgcaaggaaaaagagccgaggactgtatctgtgcttcagtgtgatattgaaatgaagagttaccaaggtcactccg tgtcaaaggtcaaacatgtagtagagaaagatattgccctgaagcctgatgaagaaaagtctgtaaaaataaaagtggaa ggaaaggagtacgttgatagcttgattgaacaagccgccatgggaatagatgttgcagcgatagtaaaggaaaccaggcg aatcgcaattaagtcggacgacttccgtctgagacgaccagatttggagttatcggtccctgataagattaagaaggaca ttccttttaatgtaactgttagcctgaagaacaccatgcccaaggatctgactggagttgaaattgacttcgatggagtt aaaggggaaggcgagtttgaagtgggaaccatcaaagccaattccgaatggaagggtgaattccagatcgccgtgaagag atctggccaacatcaaatatcagcaagtctcgactctaaggaactgaaagacatcactggttgtatttgcatggacattg ataagtaa |
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Protein
| Protein ID | pfu_aug1.0_3902.1_44817.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3902.1_44817.t1 MHRANILQRTSLRISYLTVVMIKVCVCHLFVRIIFCSWVLYIWKISHPSHKTDKYERTKFRSSPEEGVLRPELVVRRGKE FNIKVTFNDEYNCDLHDLEFTFTLGKNPSPMNGTLVSCYMDETGKKSDDSAEWSVRIMDTVGKDLYVGITPPCDCMIGEW NMFIVTISKMKDGEVGLQYEHEEDITVLLNPWCKVCRAIGLPCRSVTNFASAHDTDKSMTIDSVYEECEDGSLNHLPELS SDSVWNFHVWNEVWTARCDLEPGFDGWQVIDATPQERSEGLFVCGPSPLAAIKKGLIGIGYDTAFIMAEVNSDKIRYKYD RQTEEYTKISVERDSVGRNISTKIPDGKPFNDNLSWMAFKLREDLTDCYKFKEGSDEERKAVMTANLASKDPRNIVDNPE KDVEITLVDNDHKMVGEDFEVEILVKNVCKEKEPRTVSVLQCDIEMKSYQGHSVSKVKHVVEKDIALKPDEEKSVKIKVE GKEYVDSLIEQAAMGIDVAAIVKETRRIAIKSDDFRLRRPDLELSVPDKIKKDIPFNVTVSLKNTMPKDLTGVEIDFDGV KGEGEFEVGTIKANSEWKGEFQIAVKRSGQHQISASLDSKELKDITGCICMDIDK |
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