Gene
| Gene Model ID | pfu_aug1.0_39022.1_05067 |
|---|---|
| Locus | scaffold39022.1 : 1 ... 5840 : + |
| To GenomeBrowser | scaffold39022.1:1..5840 |
| Genes list of scaffold | scaffold39022.1 |
| Synonym | pfu_aug2.0_12.1_06739 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_39022.1_05067.t1 | 1 | 1 | Adaptin_N | 1 | 175 | 3.3e-36 | 124.6 | 7.4e-40 | 3.7e-36 | 124.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_39022.1_05067.t1 | gi|41054423|ref|NP_955976.1| | AP-1 complex subunit gamma-1 [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_39022.1_05067.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39022.1_05067.t1 acgtgcggtagagttgtcatttgccttgattaacgctaacaatgtgagaggaatgatgaaagaactgctgtcgttcttag aaaattgtgatccggaattcaaagctgactgttgttctaacatagtccaagcagcagaatcatatgctccaaacaagagg tggcacatagacactgtaatgaaagtcttaacaacggcgggtagttcagtgagggaggatgtagtgtccatactgataca gcttatagcagagacaaaccagctacacaattacacggtacaacaactgtttaaacgtattgaggacgatgtatcccagc agcctctagtacaggtggcgtcttggtgtataggggagtacggagagaaactcgtgtcagggacatgtgaagaggatgaa cctgtacaggtatctgaggatgaggtagtggacgtgttagagaaagtcctgtccatgaattactgtgaagaagtcaccaa agagtacgctatgaacgctctaatgaaactaagctctcggtttaggacctccatagg |
|
Protein
| Protein ID | pfu_aug1.0_39022.1_05067.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39022.1_05067.t1 RAVELSFALINANNVRGMMKELLSFLENCDPEFKADCCSNIVQAAESYAPNKRWHIDTVMKVLTTAGSSVREDVVSILIQ LIAETNQLHNYTVQQLFKRIEDDVSQQPLVQVASWCIGEYGEKLVSGTCEEDEPVQVSEDEVVDVLEKVLSMNYCEEVTK EYAMNALMKLSSRFRTSI |
|