Gene
| Gene Model ID | pfu_aug1.0_3905.1_59371 |
|---|---|
| Locus | scaffold3905.1 : 25966 ... 28881 : + |
| To GenomeBrowser | scaffold3905.1:25966..28881 |
| Genes list of scaffold | scaffold3905.1 |
| Synonym | pfu_aug2.0_3699.1_32527 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3905.1_59371.t1 | 1 | 1 | Retrotrans_gag | 173 | 250 | 8.4e-06 | 25.7 | 1.8e-08 | 5.3e-05 | 23.2 |
Transcript
| Transcript ID | pfu_aug1.0_3905.1_59371.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3905.1_59371.t1 atgttcaattttgtacctagttctgatacgcctcaagagtctaatataaacaatacacaagaaagtcgaagtgttagaaa tgaaaatcataatgaaagctccagtatagctatgttagcaaaacaacaagggcaaatctctgagttgttaagtacaatga aaattattgccaagtgtctgacggaaaagtgctctgatcaaaatgaagaagtaaaaacacgttctgatgagaactctagt gacgatctgtctgaatctatcagtaatatgagtggccaaggtcacgagacagacagtgatacagaaactgagaggtcaaa attcaaaaagaaaaagaggtcaaggacaactgtactaaagttgcctcctttcgacggaaacgagtcgtggaaaatctgga agaacagattcatagaattagtagagagacggagatggcctgatgataaaaagctggacgtcctgttacaaaagatgcag agcaccgcaggcgaattcgttttcggggaattgcctaaaagtactaggagaaattttgataagctcctaaaagagttaga cagtagattcatggtcgtagagactaaaaggtcgtatgctgcgaagttcaataatagaaatcagaaatctggggagttaa ttgaacaatatgcagctgaacttaaaaagttgtactcgaaggcgtatccaggaagggatacgaccacgagaaatgaggat ctagtaagaaggttcttagatggacttttagacgacgacgcacagtttcaagtagaatttggcaaatgccctagtacaat tgatgaagccgtcagtgaagtagtaaacttcatggagacgagaaaagggcgcagagaaaggaaagtattaaggtctatct ctgtttcctctggcagcgaaaccgagtatgaatcggacacaacagagaataagaaaaagaagaaaagcaataagaaatat ggtagacagagacgcaaaataaatagcttagaaggcaagatacaaaagctcagtgaccaaataggtagagccaacggtca aaataagatagaggtcaataatgaaggccaaatggccaaaaagccagattatgtgtctaataaagcgccagttctattca gtatgcctccaccaatgtcacatggccaatatccacaagtgcctgtgctcaaaggtgtttgttataattgccatcatcca ggacattttgccagagaatgtcccttgaagcaaaatttacaagcaggaacaccacagagtaatttaaacatgaggggatc gaaccagtag |
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Protein
| Protein ID | pfu_aug1.0_3905.1_59371.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3905.1_59371.t1 MFNFVPSSDTPQESNINNTQESRSVRNENHNESSSIAMLAKQQGQISELLSTMKIIAKCLTEKCSDQNEEVKTRSDENSS DDLSESISNMSGQGHETDSDTETERSKFKKKKRSRTTVLKLPPFDGNESWKIWKNRFIELVERRRWPDDKKLDVLLQKMQ STAGEFVFGELPKSTRRNFDKLLKELDSRFMVVETKRSYAAKFNNRNQKSGELIEQYAAELKKLYSKAYPGRDTTTRNED LVRRFLDGLLDDDAQFQVEFGKCPSTIDEAVSEVVNFMETRKGRRERKVLRSISVSSGSETEYESDTTENKKKKKSNKKY GRQRRKINSLEGKIQKLSDQIGRANGQNKIEVNNEGQMAKKPDYVSNKAPVLFSMPPPMSHGQYPQVPVLKGVCYNCHHP GHFARECPLKQNLQAGTPQSNLNMRGSNQ |
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