Gene
| Gene Model ID | pfu_aug1.0_3906.1_59380 |
|---|---|
| Locus | scaffold3906.1 : 35717 ... 40828 : - |
| To GenomeBrowser | scaffold3906.1:35717..40828 |
| Genes list of scaffold | scaffold3906.1 |
| Synonym | pfu_aug2.0_44.1_13482 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3906.1_59380.t1 | 1 | 1 | Homeobox | 114 | 169 | 2.1e-22 | 78.4 | 1.1e-25 | 3.2e-22 | 77.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3906.1_59380.t1 | gi|195158361|ref|XP_002020060.1| | GL13779 [Drosophila persimilis] | 3.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| trochophore | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_3906.1_59380.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3906.1_59380.t1 tttcagatggtggccgtgctccatttttcccgccttaccactcatactatccggctctgattggccggctggacgggaga gatagtcattatccaatcacagccagcgatcccagaatttttgtacggcagataccagcgacatcatcgcctacacaaag aaacgatgacgtcacttgcaaaactaaagtgacggcaaactttgagtctgaacgtaatgattttgcgaaagattattctg aaaggattacaagtgattgcgaatcagacgatggcactgacgccaatgtttcattatcagtacccggtaataacaatgac agtaatgttaccaaagttaaaaagaagacaagaacggtgttttccagacaccaaattttctacttggaatcggctttcga tacaaaacgatatttgtcaagcaccgagagagcagaaattgcatcagctctaaatttaacagaaactcaagtcaaagtat ggttccaaaatcgcagaaataaatggaagtcacaagtatccggatctgataacggtatccctacagagcgctatccggga atgttactaggttcacaatacccgctctctgttgcagcctcacaaagtgctctgcagttctacagacgtccaatgtttta cttctga |
|
Protein
| Protein ID | pfu_aug1.0_3906.1_59380.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3906.1_59380.t1 SDGGRAPFFPPYHSYYPALIGRLDGRDSHYPITASDPRIFVRQIPATSSPTQRNDDVTCKTKVTANFESERNDFAKDYSE RITSDCESDDGTDANVSLSVPGNNNDSNVTKVKKKTRTVFSRHQIFYLESAFDTKRYLSSTERAEIASALNLTETQVKVW FQNRRNKWKSQVSGSDNGIPTERYPGMLLGSQYPLSVAASQSALQFYRRPMFYF |
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