Gene
| Gene Model ID | pfu_aug1.0_391.1_58091 |
|---|---|
| Locus | scaffold391.1 : 615 ... 21165 : - |
| To GenomeBrowser | scaffold391.1:615..21165 |
| Genes list of scaffold | scaffold391.1 |
| Synonym | pfu_aug2.0_254.1_13888 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_391.1_58091.t1 | 2 | 1 | MFS_1 | 127 | 187 | 1.9e-15 | 56.4 | 1.4e-10 | 5.4e-07 | 28.6 |
| pfu_aug1.0_391.1_58091.t1 | 3 | 1 | Sugar_tr | 127 | 184 | 4.4e-10 | 38.7 | 1.2e-09 | 4.4e-06 | 25.5 |
| pfu_aug1.0_391.1_58091.t1 | 3 | 2 | Sugar_tr | 236 | 298 | 4.4e-10 | 38.7 | 3.2e-06 | 0.012 | 14.2 |
| pfu_aug1.0_391.1_58091.t1 | 2 | 2 | MFS_1 | 321 | 511 | 1.9e-15 | 56.4 | 3.7e-10 | 1.4e-06 | 27.3 |
| pfu_aug1.0_391.1_58091.t1 | 3 | 3 | Sugar_tr | 424 | 512 | 4.4e-10 | 38.7 | 4.0e-05 | 0.15 | 10.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_391.1_58091.t1 | gi|301609731|ref|XP_002934410.1| | PREDICTED: solute carrier family 22 member 5 [Xenopus (Silurana) tropicalis] | 2.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_391.1_58091.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_391.1_58091.t1 atggacccggagacaaacgccgacgatgttcttcgtgctttaggacaatggggtcactaccagaaattccagatattact cttgtttatgggaatgtgggctacagggttccagcttctctctggtgttgtaacagggtatcgtcctttgtacgaatgca aaaatccatacgacggcaacctgtcagtgaacgcaaatatgacgtcatctttacaggagattaggatcagcaaatgccat atcaccatggtaacgaattcttccgttaccaaggaaacctgtcctatgggatatgtctattcaataccaaaggatcgttc ctttgtgactgagtgggacttggtatgtgagggtgcagagagggcggagctctcacaaacctttctgatgggaggacaga tggtcggggctgctttctttacgtcgctctccgatcgttttggtcgcaagaaaatcagcgttttctccaatttcgggttg ttcaccgtcggactgggtatagcttatgctccaaactaccaggtcttcgctggattaaggttcctcataggagctttaca acaaggaaagtcgtttcttcacggaggtgttcggatcgttactgtgggccactggggtgtgcgtactatccctgatcgga tacttgatgagggggtgctcttggcgtaccatccagattgtactgtcggcgtattccgcatccaagaggattctcttcgc tggttgctgataaataataaaatcaaagaggcagaacgaattgtcagaaaagctgcaaaaatgaacggacttaactatga tgacgtcatcaaaaatgtagaagaacgaaaaaaggagaaaaataagataatgttggaagaaatggtggtgtacaacgagc taaccagagaggaagatcgtaaaaatgacgtcataatggagctggaaacgaaggaagactatcaagtacaacattacaat gcaactcatattttcagagaaaagagaatttttctgaactcgctggtagtctggattgcatggatcactgatagcttatc ctatttcgccttgacattgacctctacatcgctggctggagacagataccttaacttctttctgatgtcggtagtggaat acccagcagttatcatcgagtacacctgtttgaacagtttatccccgtatccgctgaataatattttcatgaaaggcgca atttctagtagtaaaatgcttttaacaaagtatgttttacctgacccacaagatggtcgtcaatggaggattggaagaaa aggaaccacaatactcttccatatgatttgtggagtatcacttgcatctgccactttatgtagagaatttgcaggtggtc gggatgcccttgtaaccatgtctctgatttttaccctgattggtaagatgggcgccaccggagcatttagtacgatgttc ctctatacaccagaaatgtacccaactaatctaagaaacgttggcatagggctatcctcgtccactgctaggataggtgc tatgattgcaccatttgctggagtattgcatagaagacaaagtaatgatcatagaaacatcaaaccttcaacaaatgttc cccatggggagaagatgaaccctattgattttcaagttttccggacttttctctgcaccaaatag |
|
Protein
| Protein ID | pfu_aug1.0_391.1_58091.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_391.1_58091.t1 MDPETNADDVLRALGQWGHYQKFQILLLFMGMWATGFQLLSGVVTGYRPLYECKNPYDGNLSVNANMTSSLQEIRISKCH ITMVTNSSVTKETCPMGYVYSIPKDRSFVTEWDLVCEGAERAELSQTFLMGGQMVGAAFFTSLSDRFGRKKISVFSNFGL FTVGLGIAYAPNYQVFAGLRFLIGALQQGKSFLHGGVRIVTVGHWGVRTIPDRILDEGVLLAYHPDCTVGVFRIQEDSLR WLLINNKIKEAERIVRKAAKMNGLNYDDVIKNVEERKKEKNKIMLEEMVVYNELTREEDRKNDVIMELETKEDYQVQHYN ATHIFREKRIFLNSLVVWIAWITDSLSYFALTLTSTSLAGDRYLNFFLMSVVEYPAVIIEYTCLNSLSPYPLNNIFMKGA ISSSKMLLTKYVLPDPQDGRQWRIGRKGTTILFHMICGVSLASATLCREFAGGRDALVTMSLIFTLIGKMGATGAFSTMF LYTPEMYPTNLRNVGIGLSSSTARIGAMIAPFAGVLHRRQSNDHRNIKPSTNVPHGEKMNPIDFQVFRTFLCTK |
|