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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_391.1_58096
Locus scaffold391.1 : 131326 ... 143452 : +
To GenomeBrowser scaffold391.1:131326..143452
Genes list of scaffold scaffold391.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_391.1_58096.t1 1 1 zf-C3Hc3H 23 85 7.8e-16 57.9 1.6e-19 1.2e-15 57.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_391.1_58096.t1 gi|291239644|ref|XP_002739731.1| PREDICTED: KAT8 regulatory NSL complex subunit 2-like isoform X1 [Saccoglossus kowalevskii] 7.0e-25

Transcript
Transcript IDpfu_aug1.0_391.1_58096.t1
Definition-
>pfu_aug1.0_391.1_58096.t1
atgaatcggaaacctaacatgcttgtccatcagaggaagccccgcccacctgttgagggatccttctgtcaatacagtca
tagatcatgtatgcacaaccgactagaggggtatgagttttgcctaaaacatatacaagaggataaaaactcaccctata
agcagtgtagctatacgtccagtaagagtggaaaacgctgtcagaatgccgcacccaaacaagagagaaaagagggacta
tgcctggaacatgctaaaagaagcatcgcaatgcggcatcaagcccaccagaaacggaaacctaaagaaagtgcagagac
attattagaaggcctagatcatttcaaattatgtcccgggtctgatggaatatttgaacacaaacgtctgaaaacatcag
ctgataatgtagccaataaagcattaggtaggaattattttcaccttgttctgcccagatcttttctctattcttccttt
gagtga

Protein
Protein IDpfu_aug1.0_391.1_58096.t1
Definition-
>pfu_aug1.0_391.1_58096.t1
MNRKPNMLVHQRKPRPPVEGSFCQYSHRSCMHNRLEGYEFCLKHIQEDKNSPYKQCSYTSSKSGKRCQNAAPKQERKEGL
CLEHAKRSIAMRHQAHQKRKPKESAETLLEGLDHFKLCPGSDGIFEHKRLKTSADNVANKALGRNYFHLVLPRSFLYSSF
E

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