Gene
| Gene Model ID | pfu_aug1.0_3917.1_37743 |
|---|---|
| Locus | scaffold3917.1 : 40086 ... 47095 : + |
| To GenomeBrowser | scaffold3917.1:40086..47095 |
| Genes list of scaffold | scaffold3917.1 |
| Synonym | pfu_aug2.0_110.1_00252 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_3917.1_37743.t1 | 3 | 1 | LRR_4 | 2 | 42 | 1.7e-08 | 33.9 | 1.3e-09 | 4.6e-06 | 26.1 |
| pfu_aug1.0_3917.1_37743.t1 | 2 | 1 | LRR_8 | 2 | 57 | 7.6e-07 | 28.7 | 1.5e-09 | 5.7e-06 | 25.9 |
| pfu_aug1.0_3917.1_37743.t1 | 3 | 2 | LRR_4 | 23 | 57 | 1.7e-08 | 33.9 | 4.0e-08 | 0.00015 | 21.3 |
| pfu_aug1.0_3917.1_37743.t1 | 2 | 2 | LRR_8 | 61 | 105 | 7.6e-07 | 28.7 | 0.00057 | 2.1 | 8.1 |
| pfu_aug1.0_3917.1_37743.t1 | 3 | 3 | LRR_4 | 75 | 108 | 1.7e-08 | 33.9 | 0.0004 | 1.5 | 8.5 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3917.1_37743.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3917.1_37743.t1 atgtttcttgatctgtcgcacaatcatattgaggagttcagaaaccttgaccttggattcggatcaaaattgaaaagcct taatcttagtggtaactacataagcaatattcatataacagcattatcgtcactgaagcttctacgatttattgacctgt ccgaaaaccagcacactttaaggacgtcttccttaaacctaccgcaacatatttcaagggtggatctacatagttgccat ttgaactatatagatatatgtgggcttctccagcttcaagacctcagtttccttaatttgaatgacaatgatataatttg ctcctgtgaagtcatatggttgtctcaacacataactctgaattctcagcataatgaagaaaatttgagtaagtttcacg tggaacacgaaggtatgctagggatgtgctatgacgtagaacacaaaattcatattccattctcggacatgaaggtgaat tgctccaaagaacaatacgacaaatacgttcgctcttgtcaaccacaagctcttcgggaagagtttcgcaaccttgacga gtacgtcagcaatatgaagttaagtatctcacttgacggagagaacatccggacggaatggacacctactacatctcctt tgatatatggcttcattgtgcacgttcatgagatggaaaaagattctgcatttgactcatccattcttcatccttcagta agttcattctccaacacagaacatgaagcgtgttgtggaacgtattcaatttgtctctgggttttactcaatgaaactta catctatcacagaacatgcgaatcagtaatcgaggcaaataccaaatttgttattggtgttctggtaggcgttatgtttt taactccatgcgttattgtcatgtcatatgttgctattaaggaccgccagcaagctagatgtaaaaaggtagcagccaga ttggaaccaaagccatgcgagaaaccgcatatcccccataccccgtttggggcaacacccataatagatataatccagga ccatgctagacaaattagatattgtaaatccgaactggatctgtgtggtagtgtggcctatcacctcaatgtaccgtctg aagaatatggaagaactccggagttcaagcacagaccacttagcacagaagtagcttcggcatcttgtggaagatctcca gaatgcaaacacagagaga |
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Protein
| Protein ID | pfu_aug1.0_3917.1_37743.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3917.1_37743.t1 MFLDLSHNHIEEFRNLDLGFGSKLKSLNLSGNYISNIHITALSSLKLLRFIDLSENQHTLRTSSLNLPQHISRVDLHSCH LNYIDICGLLQLQDLSFLNLNDNDIICSCEVIWLSQHITLNSQHNEENLSKFHVEHEGMLGMCYDVEHKIHIPFSDMKVN CSKEQYDKYVRSCQPQALREEFRNLDEYVSNMKLSISLDGENIRTEWTPTTSPLIYGFIVHVHEMEKDSAFDSSILHPSV SSFSNTEHEACCGTYSICLWVLLNETYIYHRTCESVIEANTKFVIGVLVGVMFLTPCVIVMSYVAIKDRQQARCKKVAAR LEPKPCEKPHIPHTPFGATPIIDIIQDHARQIRYCKSELDLCGSVAYHLNVPSEEYGRTPEFKHRPLSTEVASASCGRSP ECKHRE |
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