Gene
| Gene Model ID | pfu_aug1.0_3921.1_37744 |
|---|---|
| Locus | scaffold3921.1 : 10746 ... 28945 : - |
| To GenomeBrowser | scaffold3921.1:10746..28945 |
| Genes list of scaffold | scaffold3921.1 |
| Synonym | pfu_aug2.0_3661.1_05871 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_3921.1_37744.t1 | gi|260837095|ref|XP_002613541.1| | hypothetical protein BRAFLDRAFT_119810 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_3921.1_37744.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3921.1_37744.t1 atggatatctttgtatgtaaatgtgttattgaaatctttgtatttaaatgtgtcatggacatctttgtttgtaattgtgt catggacatcagaatgcttcatctaaaacttgaaaattttaactttatacatgtacaccttacaagagaatttattgaaa aagagaagaaaaatttacttgccagtggaagtgagtgcgtattaaagaagctttctcagaagagtctgtataatttacgt ctaacaaagccggttgatatttccataccttgttacctgagggcagtggaggagaacatcaatgatggatgggcatggtc agtggtggcagcactgtacaagaaaaagggaagtaactctcaagccagtaccagctttaagatagcttctaaaatcctgg gaaaggtcagtccatttgttgagatgtggtattttattggtccttttgttattggtaagatggagctggatggagatcca ctagaggcttacggtggagtgaggaatgtgtcaaagtacaggtatcaaaaaacggagaaattctactcagagttagtacc tggaggtgagataaagtggggtgtttacaaacagacacatgcaggacagatgatcaaagtggcaccaaatataaactgga atgacctggtcagctcactaggatctatggggatcacagagtggcaggggtggattgtaggagagtttgccgtcaacgag aaagatctcaatcttatgatccgatgtatgggtgtacatacggtatacatcgatgacattcctctaacaggtgacgtgta tcatagacagcagtactggagtggagtgcacttatcacaaggcattcataccatctatataaaacttagaactaaagtag cagcaaactttgattgttctattgaaatagctaagtctgctttccaactacacaatcctcattttattccagatttagtc aatggatttctattcagtcagtttgtggcctttcccatgtccaactatcatcatacaaaatgggtcaaggtcacaaaggt tactataactgaccaagatgaagatggaaaggtcaaggttagacttcttaaatctgttaccatagcacctggtcagacaa tgcctgtcattcttaaattttcatcactggataaagttatggaaaaatgcaaagatgatgctgcatacagcctggaattc agaattacttcatcagacggaattattgattcaagtataaaatttcgctgtcgtagtttatatcagtcttttttgtttac gttcattgatcatgatggcagcttacaacatgctgctgcaattccaccaatcaaatcctgtgatacaaagagatgtccag tggttctaacactgcacggtacaacagttccaccacagaaccaggcagatagctataagagaatggcggagggggaatat gtgtttggtgtggacaatgcttggcttctggcaccaacaaggaagacaaatgatggcggtgctgtaaatgatccacagtt aagggactttacaaacaagtttgtatcaaagtcactagagggcggttcacagtgtgacagtatccatggtgaggaggatt gtgggaagtcagagtttgatagatattcccagaattccatgacaaagagggagtttaccttgaccacgtataatcctgct ttaggggacggtatgaatggtctgagagtaatccagcagattactcctctcaggaaaagtgaagttcattgtacagtagg ggaaaacactgtggagatagacactgtgaacgtggccaaattcagtattgagaaaatcaggaatcgaccaataaaatggt ctgataaatcagttaagatcaataagcgcccagtagagatagagattggtaatgatatatcatacttgtgttacaaatca ggacgttggtcagtttgttcaggaataaaggacacagaaagagggccagacacttatggacctgcacgaagaatagctga gcaggagtttgttatcgtagtgggaacccagagctccaaccaaactataacagaactattgttacagtcagctgtgtata tagccaatctgttcttccttacttctgatactttagcacctatactgaaagacgaggatatacaaacatctgatgaacgt aatttaatactgctaggtggtccagaagaaaatctacatacaactttcttcctagagaaactgcccatcacattcaaaga tggtacattgactatagagagctgtacctatcaccatgacagacaaggactgatgaccttagctcctcaccatggtaata gactagccatgattctgtttggatcctccccaagtggattcctggatgtcgtttccttggcaacacctaccattcctcca atgactagatcgccattttccaacttactcccagattatgtgttgactggtccagattttgggatgaagggaccaggtgg attcctttgtactggtttctatggtaacagatgggaatatagagcagatacgtcttcatgtgtttgtttatga |
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Protein
| Protein ID | pfu_aug1.0_3921.1_37744.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_3921.1_37744.t1 MDIFVCKCVIEIFVFKCVMDIFVCNCVMDIRMLHLKLENFNFIHVHLTREFIEKEKKNLLASGSECVLKKLSQKSLYNLR LTKPVDISIPCYLRAVEENINDGWAWSVVAALYKKKGSNSQASTSFKIASKILGKVSPFVEMWYFIGPFVIGKMELDGDP LEAYGGVRNVSKYRYQKTEKFYSELVPGGEIKWGVYKQTHAGQMIKVAPNINWNDLVSSLGSMGITEWQGWIVGEFAVNE KDLNLMIRCMGVHTVYIDDIPLTGDVYHRQQYWSGVHLSQGIHTIYIKLRTKVAANFDCSIEIAKSAFQLHNPHFIPDLV NGFLFSQFVAFPMSNYHHTKWVKVTKVTITDQDEDGKVKVRLLKSVTIAPGQTMPVILKFSSLDKVMEKCKDDAAYSLEF RITSSDGIIDSSIKFRCRSLYQSFLFTFIDHDGSLQHAAAIPPIKSCDTKRCPVVLTLHGTTVPPQNQADSYKRMAEGEY VFGVDNAWLLAPTRKTNDGGAVNDPQLRDFTNKFVSKSLEGGSQCDSIHGEEDCGKSEFDRYSQNSMTKREFTLTTYNPA LGDGMNGLRVIQQITPLRKSEVHCTVGENTVEIDTVNVAKFSIEKIRNRPIKWSDKSVKINKRPVEIEIGNDISYLCYKS GRWSVCSGIKDTERGPDTYGPARRIAEQEFVIVVGTQSSNQTITELLLQSAVYIANLFFLTSDTLAPILKDEDIQTSDER NLILLGGPEENLHTTFFLEKLPITFKDGTLTIESCTYHHDRQGLMTLAPHHGNRLAMILFGSSPSGFLDVVSLATPTIPP MTRSPFSNLLPDYVLTGPDFGMKGPGGFLCTGFYGNRWEYRADTSSCVCL |
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