Gene
| Gene Model ID | pfu_aug1.0_39331.1_62990 |
|---|---|
| Locus | scaffold39331.1 : 1840 ... 4986 : + |
| To GenomeBrowser | scaffold39331.1:1840..4986 |
| Genes list of scaffold | scaffold39331.1 |
| Synonym | pfu_aug2.0_277.1_23794 |
Manual annotation
| Study field | signal molecules |
|---|---|
| Gene name | Wnt6 |
| Description | Blast hits to various animals Wnt6.Best blast hits to amphioxus Wnt6. |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_39331.1_62990.t1 | 1 | 1 | wnt | 2 | 116 | 4.8e-38 | 131.0 | 3.59994e-42 | 5.3e-38 | 130.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_39331.1_62990.t1 | gi|260807657|ref|XP_002598625.1| | hypothetical protein BRAFLDRAFT_57222 [Branchiostoma floridae] | 9.0e-35 |
Transcript
| Transcript ID | pfu_aug1.0_39331.1_62990.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39331.1_62990.t1 atgttaaaggaaaaatttgacggtgctatacaggtgcaaagttcaaacgacggaaaaagacttgaaacggtgcatcctac tataaaacctccgtctgtacaagatatcgtctattcagaaacttctccgaatttttgtagaagaaataaaaaagttggtt ccatgggaacgaaaggtcggttatgtgatccgacctccataggggtcggagggtgtgacttactatgctgtaatagggga tataaatcggagactatccgacttcgagaaaattgtaaatgtagatttgtttggtgctgtgaagtacattgtcagacttg tgaacacgataaaacattcaacaggtgcttatga |
|
Protein
| Protein ID | pfu_aug1.0_39331.1_62990.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_39331.1_62990.t1 MLKEKFDGAIQVQSSNDGKRLETVHPTIKPPSVQDIVYSETSPNFCRRNKKVGSMGTKGRLCDPTSIGVGGCDLLCCNRG YKSETIRLRENCKCRFVWCCEVHCQTCEHDKTFNRCL |
|